Ayush Raman Email and Phone Number

I am a Computational Staff Scientist at CCR, NCI, NIH. I am interested in understanding the dynamics of gene regulation using single-cell genomics. I develop tools/approaches for data analysis and apply machine learning algorithms to understand biology.CV/Resume:Resume: https://araman.rbind.io/media/Resume_AR_Mar23.pdfAcademic CV: https://araman.rbind.io/media/CV_AR_Mar23.pdfScholar: https://scholar.google.com/citations?user=IaLzKOIAAAAJSkill set summary:• Languages: R (tidyverse & Bioconductor), Perl, Python, Bash, LATEX, SQL• Next Gen Data Analysis: Bulk ATAC-/ChIP-/RNA-seq, single-cell ATAC-/RNA-seq, Long-read seq (1+ year), NanoString nCounter, Microarray, Detection & correction of Batch Effects• Machine Learning Algorithms: Clustering (k -means, hierarchical clustering, NMF, semi-NMF), Dimensionality reduction methods (PCA, ICA, t-SNE, UMAP, MDS), Classification Algorithms (Naive Bayes, Linear Discriminant Analysis, Decision Trees, Random Forest, SVM,Logistic Regression), Regression (Linear, GLM), Regularization (LASSO, Ridge, Elastic-net)• High Performance Computing: Load Sharing Facility (LSF), Condor• Cloud Computing: Google Cloud Computing, Terra• Pipeline Development Tools: Version control (Git), Workflow manager (Snakemake, WDL)• Soft skills: Communication, collaboration, honesty, adaptability, creativity, conflict management, punctuality, critical thinking and goal settingAwards:* Junior Research Parasite award '20 (https://researchparasite.com/ & https://en.wikipedia.org/wiki/Research_Parasite_Award)* Young Scientist Excellence Award '20, MCBIOS