Andreas Kraemer Email and Phone Number
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Experienced scientist with expertise developing advanced computational algorithms in biology, chemistry, and physics. Proven ability to provide scientific and technical leadership, and deliver innovative solutions and product features. Experienced working in interdisciplinary and cross-functional settings in collaboration with domain scientists and software engineering teams. Recent projects involve biological interpretation of genomic and gene-expression data, network algorithms, ontology-derived pathway models, and statistical genetics. Interests: predictive modeling of biological systems, gene-regulatory networks, statistical and biological physics, machine learning, data analysis and visualization, computer science and software design patterns. Skilled programmer with extensive software development experience in Python and C including scientific computing using Numpy, Scipy, Pandas, scikit-learn, and Matplotlib libraries.
Qiagen Silicon Valley (Formerly Ingenuity Systems)
View- Website:
- qiagen.com
- Employees:
- 4245
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Staff Computational Systems BiologistQiagen Silicon Valley (Formerly Ingenuity Systems) May 2013 - PresentRedwood City, CaResponsibilities include research, development, and productization of algorithms and methods that operate over biological networks and genomic data, driving innovations for Ingenuity Pathway Analysis (IPA) and Variant Analysis (VA) products. In particular, leading design and implementation of statistical algorithms and other features available in VA (e.g. statistical association filters, pedigree inference, ancestry prediction, druggable pathways), as well as developing and prototyping causal analysis algorithms for IPA (e.g. Pathway Activity Analysis).[IPA is a web-based application to interpret biological data that has been broadly adopted in the life science research community. VA is a widely used tool to identify causal variants in human sequencing data.]
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Computational Systems BiologistIngenuity Systems Mar 2004 - May 2013Redwood City, CaContributed to and provided leadership for numerous projects involving product features of Ingenuity Pathway Analysis (IPA) and Variant Analysis (VA), back-end algorithms, as well as scientific services for customers. Among others:Led development, prototyping and publication of IPA causal analysis algorithms (Upstream Regulator Analysis, Mechanistic Networks, Causal Network Analysis) partly in collaboration with a pharma customer.Led design and implementation of statistical association filters, copy number analysis, and biological network algorithms in VA.Led interdisciplinary hypothesis algorithm and visualization teams in the course of a multi-year project aimed at broad-spectrum, host drug target discovery in the context of infectious diseases (in collaboration with USAMRIID).
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Research Associate/Advisory EngineerIbm Almaden Research Center Jul 2000 - Sep 2002Research and development of 3D molecular similarity search algorithms involving chemical feature-based pattern matching and a fragmentation approach for sampling of molecular conformations; also performed molecular dynamics simulations of proteins. -
Staff ScientistSchott Glass Jan 1999 - Jul 2000Mainz, GermanyResearch and development involving atomistic simulation (DFT, MD, QM/MM) to predict optical and structural properties of defects in glass and glass ceramics.
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Visiting ScholarStanford University, Department Of Applied Physics Jun 1996 - Nov 1998Stanford, CaResearch in condensed matter physics involving Quantum Monte Carlo simulations. -
ScientistMax-Planck Institute For Solar System Research Jan 1996 - May 1996Goettingen, Germany
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Research Assistent/LecturerFreie Universität Berlin, Institute Of Theoretical Physics Jan 1990 - Dec 1995Berlin. Germany
Andreas Kraemer Skills
Andreas Kraemer Education Details
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Theoretical Physics
Frequently Asked Questions about Andreas Kraemer
What company does Andreas Kraemer work for?
Andreas Kraemer works for Qiagen Silicon Valley (Formerly Ingenuity Systems)
What is Andreas Kraemer's role at the current company?
Andreas Kraemer's current role is Computational Systems Biologist at Qiagen.
What is Andreas Kraemer's email address?
Andreas Kraemer's email address is ak****@****ail.com
What schools did Andreas Kraemer attend?
Andreas Kraemer attended Freie Universität Berlin, Technische Universität Braunschweig.
What skills is Andreas Kraemer known for?
Andreas Kraemer has skills like Computational Biology, Systems Biology, Bioinformatics, Machine Learning, Genomics, Algorithms, Python, Statistics, Molecular Modeling, Data Mining, R&d, Dna Sequencing.
Who are Andreas Kraemer's colleagues?
Andreas Kraemer's colleagues are Alfred Venable, Kim Landauer, Dan Kho, Jakub Katafiasz, Barbara Fahrenkampf, Xin Qiagen, Véronique Lolerie.
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Ventura, Ca
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