As a Research Associate at the University of Pennsylvania, I apply my expertise in molecular and cellular biology, cryo-EM, CRISPR-Cas9, and protein engineering to study the onset and progression of centromere-kinetochore assembly during cell division and its implications in chromosome inheritance. I have over eight years of experience in designing, developing, and executing collaborative projects that uncover key insights into the molecular details of protein complex organization and function, developing genetic tools for cell based assays.My research interests revolve around understanding the dynamics and reorganization of macromolecules that occur during biological processes, and establishing structure-function relationships. I am also proficient in developing and implementing gene editing tools and creating stable mammalian cell lines, biochemical purification tools for diverse biomolecules, ensuring a steady stream of high-quality samples essential for collaborative research and industrial applications. I am motivated by the challenge of solving complex biological problems using innovative and interdisciplinary approaches.
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Research AssociateUniversity Of Pennsylvania Mar 2021 - Jan 2024Philadelphia, Pennsylvania, United States• Designed and executed 3 projects in collaboration with chemical and cell biologists to study the onset and progression of centromere-kinetochore assembly during cell division and implications in chromosomes inheritance. • Designed and created the repair templates/guides for bi-allelic gene replacement, CRISPR-cas9 gene editing, tagging/knockin/knockout proteins and Flp-FRT site-specific recombination-based editing in human cells.• Developed and executed cell based assays to drug-induced crosslinking and controlled reversible dimerization of macromolecules and study protein-protein dynamics in cells.• Quantitate analysis of centromere protein complex dynamics using ImageJ/Fiji image analyses in cells• Established tools and analyzed the precise role of CENP-C mutants in centromere functions and role in chromosome segregation. • Designed and Constructed insect cell and bacterial cell expression systems of 17 kinetochore proteins. -
Postdoctoral ResearcherUniversity Of Pennsylvania Mar 2016 - Mar 2021Philadelphia, Pennsylvania, United States• Designed, developed, and executed 3 collaborative projects with structural scientists, uncovering key insights into centromere function in chromosomes inheritance, published in 3 papers. These works significantly advanced our understanding of centromere stability and its implications in cancer biology.• Purified, and solved the structures of human core centromere nucleosomes complex using Cryo-EM, RELION, cryoSPARC tools.• Designed and implemented high-precision biochemical purification tools for diverse biomolecules like DNA, histones, and polymerases, ensuring a steady stream of high-quality samples essential for collaborative research and industrial applications.• Identified the novel functional compositions of CENP-C and CENP-N on CENP-A nucleosomes, this research contributes for future research aimed at combating diseases associated with centromere malfunction. • Developed invitro and cell-based assays to quantify the dynamics of biomolecules, stability of nucleo-protein complexes. • Designed and executed the generation of monoclonal cell lines through CRISPR/Cas9, transduction and FACS sorting techniques. • Executed cell survival, colony formation and localization experiments efficiently to study the functions of centromere in chromosomes biology.• Mentored/supervised a range of junior scientists, including biochemists and molecular biologists. -
JrfNational Centre For Biological Sciences (Ncbs) Jan 2009 - Oct 2009Bengaluru, Karnataka, India• Executed a large-scale microRNA knockdown screen in Drosophila for understanding mitochondrial morphology and disease mutants.• Generated and Maintained Drosophila strains, performed morphology phenotypes and Mito tracker-based assays for studying mitochondrial biogenesis. -
Proect JrfCsir−Central Food Technological Research Institute (Cftri) Aug 2008 - Oct 2008Mysore, Karnataka, IndiaUsed biochemical and functional techniques to analyze the stability of wheat proteins.
Praveen Kumar Allu Education Details
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Biochemistry -
7.5/10
Frequently Asked Questions about Praveen Kumar Allu
What is Praveen Kumar Allu's role at the current company?
Praveen Kumar Allu's current role is R&D Scientist | Biochemist & Molecular/Cellular Biologist | CRISPR & Genome editing | Expert in protein engineering & cell line development | Project Design & Development.
What schools did Praveen Kumar Allu attend?
Praveen Kumar Allu attended University Of Hyderabad, Sri Venkateswara University.
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Praveen Kumar Allu
Mechanical Engineer| M.Sc | Plastic Technology | Composites | Additive ManufacturingKaiserslautern -
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