Anatoly Vasilyev

Anatoly Vasilyev Email and Phone Number

Senior Bioinformatician @ Myllia Biotechnology
Vienna, Austria
Anatoly Vasilyev's Location
Vienna, Vienna, Austria, Austria
About Anatoly Vasilyev

Anatoly Vasilyev is a Senior Bioinformatician at Myllia Biotechnology. He possess expertise in programming, linux, data analysis, software architecture, scrum and 20 more skills. He is proficient in German and English.

Anatoly Vasilyev's Current Company Details
Myllia Biotechnology

Myllia Biotechnology

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Senior Bioinformatician
Vienna, Austria
Website:
aelian.bio
Employees:
24
Anatoly Vasilyev Work Experience Details
  • Myllia Biotechnology
    Senior Bioinformatician
    Myllia Biotechnology
    Vienna, Austria
  • Myllia Biotechnology
    Bioinformatician
    Myllia Biotechnology Oct 2019 - Present
    Vienna, Vienna, Austria
    Here at Myllia, I'm involved in a very broad range of exciting projects and topics, including:- Single cell RNA-seq data analysis from CRISPR screens (using STAR & Seurat)- Analysis of many other various NGS datasets (using a large variety of tools)- Biomage analysis: cell segmentation & signal quantification (in python)- Implementation of superior sgRNA design algorithm using machine learning models- Implementation of multiplex PCR primers design pipeline for targeted… Show more Here at Myllia, I'm involved in a very broad range of exciting projects and topics, including:- Single cell RNA-seq data analysis from CRISPR screens (using STAR & Seurat)- Analysis of many other various NGS datasets (using a large variety of tools)- Biomage analysis: cell segmentation & signal quantification (in python)- Implementation of superior sgRNA design algorithm using machine learning models- Implementation of multiplex PCR primers design pipeline for targeted scRNA-seq readouts- In silico protein mutagenesis & phylogenetic analysisCore techs: R, python, Linux and everything around it, including a lot of bash.I prefer R for general data analysis (the data.table way) & plotting, and I prefer python for image analysis and more production-oriented pipelines. Show less
  • Logicx Consulting & Workflow Integration Gmbh
    Software Engineer
    Logicx Consulting & Workflow Integration Gmbh Oct 2017 - Oct 2019
    Vienna, Austria
    In Logicx I was employed as a Full-stack Developer mostly involed in business line applications.Core techs/skills: .net, .net-core, c#, microservices, APIs, databases, data scienceApart from business line, I participated in some R&D projects: - Predictive Maintenance- NLP (receipts text recognition & text parsing & analysis)- Image analysis: recognition of railway infrastructure elements on photos (using TensorFlow)
  • Knomics
    Data Scientist / Bioinformatician
    Knomics Aug 2015 - Oct 2017
    Moscow, Russia
    In Knomics, my primary role was Data Scientist. At the same time I was heavily involved in various client-centric software projects.Core techs/skills: python, R, linux, bash, Amazon Web Services, architecture, biology, metagenomics, bioinformatics, SCRUMBelow is a description of several key projects where I was involved:1. https://atlas.ru/microbiome - a human gut microbiome test which helps users discover the bacteria present in their gut and explore their various… Show more In Knomics, my primary role was Data Scientist. At the same time I was heavily involved in various client-centric software projects.Core techs/skills: python, R, linux, bash, Amazon Web Services, architecture, biology, metagenomics, bioinformatics, SCRUMBelow is a description of several key projects where I was involved:1. https://atlas.ru/microbiome - a human gut microbiome test which helps users discover the bacteria present in their gut and explore their various properties. My role here was senior developer & software architect.2. https://biota.knomics.ru/ - online service for exploratory analysis of human gut metagenomes. Our big project with Skolkovo. A web-service which has QIIME pipeline behind and further data analysis in R. Intended to be used by scientists or people who have metagenomic data. Again my role here was senior developer & software architect.3. Human gut microbiome related text-mining - mining info in huge amounts of scientific texts about human gut microbiome. Techs included are spaCy, word2vec, doc2vec, machine learning pipeline. Show less
  • Prognoz
    Java Programmer (Intern)
    Prognoz Aug 2014 - Mar 2015
    Moscow, Russia
    We were developing software that helps banks automate business processes. I was a GWT (Google Web Toolkit) developer.
  • Consult-Invest
    .Net C# Developer (Intern)
    Consult-Invest Sep 2013 - Jan 2014
    Moscow, Russia
    We were developing an AI system for stocks trading. One of the highlights is that we used Scrum development methodology.
  • Systemprom
    Java Swt Developer (Intern)
    Systemprom Jan 2013 - Aug 2013
    Moscow, Russia

Anatoly Vasilyev Skills

Programming Linux Data Analysis Software Architecture Scrum Bioinformatics Software Development Amazon Web Services Python R Object Oriented Programming Natural Language Processing Text Mining Web Development Java Databases Parallel Computing Jboss Application Server Postgresql Life Sciences Research Agile Methodologies Database Design Sql Docker

Anatoly Vasilyev Education Details

Frequently Asked Questions about Anatoly Vasilyev

What company does Anatoly Vasilyev work for?

Anatoly Vasilyev works for Myllia Biotechnology

What is Anatoly Vasilyev's role at the current company?

Anatoly Vasilyev's current role is Senior Bioinformatician.

What schools did Anatoly Vasilyev attend?

Anatoly Vasilyev attended Moscow State University Of Instrument Engineering And Computer Sciences (Mgupi).

What skills is Anatoly Vasilyev known for?

Anatoly Vasilyev has skills like Programming, Linux, Data Analysis, Software Architecture, Scrum, Bioinformatics, Software Development, Amazon Web Services, Python, R, Object Oriented Programming, Natural Language Processing.

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