André Pedersen Email and Phone Number
André is a Senior Machine Learning Engineer at Sopra Steria. He has a strong portfolio from working with machine learning, computer vision, natural language processing, software development, and computational statistics, specifically in the field of medicine.The data types he has worked with are varied, ranging from from 3D MRI/CTs, gigapixel histopathological images (>200k x 160x), bronchoscopy videos, ultrasound scans, free text, and recently mobile sensor data. André has a background in developing desktop applications (C++, Python), mobile applications (Flutter/Dart), and web-based software applications primarily using Azure for cloud, Quart/MS-SQL/PostgreSQL for backend, and Streamlit/Gradio for web UI development.André is an open source advocate, aiming to accelerate research through making all his research and source code as public and easily accessible as possible.More information about his open source software contributions on GitHub: https://github.com/andrepedMore information about his research and teaching on personal website: https://andreped.dev
Sopra Steria
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Senior Machine Learning EngineerSopra Steria Oct 2023 - PresentTrondheim, Trøndelag Fylke, Norge• Part of the Applications team at Sopra Steria with focus on machine learning and cloud development.• On project with the UNICAN team at NTNU to develop state-of-the-art, easily accessible AI solutions for digital pathology.• Member of the Generative AI board in Sopra Steria's rAIse program. -
Data Scientist/EngineerEquinor Nov 2023 - PresentBergen, Vestland, Norge• Developing chatbot for AI-assisted planning during drilling and well operations. -
Team LeadAutility Jun 2024 - Aug 2024Trondheim, Trøndelag, Norge• In-charge of summer project responsible for three software developer interns.• Developed generative AI-accelerated prototype to assess a building's environmental sustainability. -
Research ScientistSintef Digital May 2022 - Nov 2023Trondheim, Trøndelag, Norway• Part of Medical Image Analysis research group.• Consulted on numerous research projects and grant applications, either through tutoring colleagues, implementing components in algorithm or deployment design, statistical analysis in assessment of trained models, or development of accessible technologies.• Key contributor to the FastPathology open software project in C++ using Qt5 and FAST.• DevOps responsible for open-source clinical software, Raidionics, enabling automatic segmentation of pre- and postoperative brain tumors and generation of standardized clinical report.• Developed open software plugin enabling cloud-based deployment of AI-solutions for digital pathology, FP-DSA-plugin.• Developed 4 applications demonstrating AI-based medical 3D image segmentation, using Gradio and hosted on Hugging Face Spaces.• Developed open python package GradientAccumulator to enable gradient accumulation in TensorFlow 2 released on PyPI.• Codeveloped a python package to enable rapid stain normalization for histopathological images, torchstain, supporting PyTorch, TF, and NumPy. -
Master Of ScienceSintef Digital Jan 2019 - May 2022Trondheim, Trøndelag Fylke, Norge• Part of Medical Technology research group.• Lead SINTEF-funded project to enable code-free development and deployment of deep segmentation models for computational pathology:- Trained clinical pathologists with no background in programming or deep learning to train and deploy his own convolutional neural network for semantic segmentation of gigapixel histopathological images.- Orchestrated collaboration with researcher Ilya Belevich and lead developed of MIB at University of Helsinki. Final work published here: https://www.frontiersin.org/articles/10.3389/fmed.2021.816281/fullUseful summary of work and code repository here: https://github.com/andreped/NoCodeSeg• Co-supervised 1 Master's student working on semantic segmentation of lung lobes in CTs using memory-efficient 3D U-Net architecture capable of using entire CT volume as input, enabled through seperable convolutions mixed precision in PyTorch-Lightning.• Contributed to several funding applications on various topics with focus on software as a medical device and use of AI for medical applications. Contributed strongly to the AI, software, and statistics work packages, of which multiple achieved funding from the Norwegian Research Council.• Performed statistical analysis and aided in method development and consulted in research activities, mainly focused on machine learning and computer aided designs, such as:- Supervised segmentation of brain tumors in MRIs - 5 separate papers (ex: https://www.frontiersin.org/articles/10.3389/fradi.2021.711514/full).- Supervised lymph node segmentation in CTs (https://arxiv.org/abs/2102.06515).- Unsupervised detection of adverse events from free-text (https://github.com/andreped/adverse-events).- Responsible for statistical analysis for nanobubble-guided cancer treatment study (https://doi.org/10.1016/j.ultrasmedbio.2020.12.026). -
Phd FellowNorges Teknisk-Naturvitenskapelige Universitet (Ntnu) Oct 2019 - Sep 2023Trondheim Area, Norway• Research and deployment of methods in computational pathology to produce a software for assisting pathologists in clinical practice.• Paper 1: FastPathology: An Open-Source Platform for Deep Learning-Based Research and Decision Support in Digital Pathology (2021). IEEE Access. https://ieeexplore.ieee.org/document/9399433• Paper 2: H2G-Net: A multi-resolution refinement approach for segmentation of breast cancer region in gigapixel histopathological images (2022). Frontiers in Medicine. https://www.frontiersin.org/articles/10.3389/fmed.2022.971873/full• Supporting articles:- Code-Free Development and Deployment of Deep Segmentation Models for Digital Pathology (2022). Frontiers in Medicine. https://www.frontiersin.org/articles/10.3389/fmed.2021.816281/full- High Performance Neural Network Inference, Streaming, and Visualization of Medical Images Using FAST (2019). IEEE Access. https://ieeexplore.ieee.org/document/8844665/ -
Student Teaching AssistantUit The Arctic University Of Norway Aug 2017 - Nov 2018Tromso Area, Norway• In charge of programming workshop in Python & MATLAB, running each fall.• Tailored for students participating in the courses: FYS-1001 Mechanics & FYS-2006 Signal Processing. -
Summer InternshipSintef Jun 2018 - Aug 2018Trondheim Area, Norway• Implemented end-to-end pipeline for lung nodule cancer screening in CTs, from rawimage format to inference & visualization in software prototype.• Implemented simple morphological-based algorithm for automatic lung segmentation in CTs.• Implemented semi-supervised seed-based algorithms for tumor segmentation in CTs. -
Substitute TeacherManndalen Skole Nov 2013 - Jun 2014Manndalen, Norway• Teached kids 6-15 years old in topics like mathematics, natural science, & gymnastics.
André Pedersen Education Details
Frequently Asked Questions about André Pedersen
What company does André Pedersen work for?
André Pedersen works for Sopra Steria
What is André Pedersen's role at the current company?
André Pedersen's current role is Senior ML Engineer @ Sopra Steria.
What schools did André Pedersen attend?
André Pedersen attended Norges Teknisk-Naturvitenskapelige Universitet (Ntnu), Uit- The Arctic University Of Norway.
Who are André Pedersen's colleagues?
André Pedersen's colleagues are Martin Bull, Simon Diedrich, Wendy Curtis, Rachel Lawson, Sabelia Ruiz Cedeño, Muhammed Riyaz Ali U, Andrea Klemann.
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André Pedersen
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