A computational biologist with a decade of lab experience, demonstrating expertise in Python, R, Bash Scripting, and Next Generation Sequencing. Known for delivering accurate and valid data analyses across diverse datasets, overseeing the development and implementation of bioinformatic pipelines, and executing analyses for haploid and polyploid organisms. Brings a strong background in molecular biology and genetics wet lab, coupled with a substantial bioinformatics experience, network administration, and server stack maintenance. Continually engaged in enhancing genomic data analysis and data quality assurance through the evaluation of peer-reviewed materials for new bioinformatic tools and software.
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Bioinformatics ScientistSeqcenter May 2022 - Present• Develop, update, and implement bioinformatic pipelines to ensure accurate and valid data analyses across human, microbial, and botanical datasets.• Oversee the function, operation, and updates to a high performance compute cluster while maintaining user accounts and permissions for seamless use across systems.• Carry out Illumina/Nextera Library Prep kits for customer submitted samples of various host organisms or isolated pathogens.• Prepare final pools and load the MiSeq, NextSeq 550, NextSeq2000, NovaSeq6000, and NovaSeq X Plus. -
Doctoral Candidate And Bench-Side ScientistDuquesne University Aug 2016 - Aug 2022Pittsburgh, Pa, Us• Successfully defended my dissertation work on May 12th, 2022. Thesis Title: Identification and Characterization of Genetic Elements that Regulate a C-di-GMP Mediated Multicellular Trait in Pseudomonas Fluorescens (https://dsc.duq.edu/etd/2085/).• Conducted clinically relevant research to identify 191 gene variants that may lead to disease using experimental evolution and molecular biology techniques to characterize cyclic di-GMP regulation. -
Bioinformatics Research AssistantWright Labs Jun 2014 - Aug 2016Huntingdon, Pa, Us• Analyzed clinical NGS data of viral and fungal pathogens using Bash and Perl scripts.• Generated reports to display functional information of genes implicated in disease.
Collin Kessler, Ph.D. Education Details
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Duquesne UniversityBiology -
Juniata CollegeBiology
Frequently Asked Questions about Collin Kessler, Ph.D.
What company does Collin Kessler, Ph.D. work for?
Collin Kessler, Ph.D. works for Seqcenter
What is Collin Kessler, Ph.D.'s role at the current company?
Collin Kessler, Ph.D.'s current role is Team Lead – Bioinformatics Scientist.
What schools did Collin Kessler, Ph.D. attend?
Collin Kessler, Ph.D. attended Duquesne University, Juniata College.
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