Cory Gargas, Ph.D. work email
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Cory Gargas, Ph.D. personal email
As a Computational Biologist, I am a passionate and dedicated scientist focused on advancing research by integrating wet lab and computational techniques. My career began with a strong foundation in field biology and laboratory research, which has evolved into a specialization in computational biology. I am experienced in working with large biological datasets and leveraging computational tools to generate insights. This has made me proficient in Linux systems, command-line interfaces, genomic and microbiome analyses, and phylogenetics, where I apply computational methods to study evolutionary relationships.A key strength of mine is the ability to handle complex biological data. I am skilled in data wrangling and statistical analysis using BASH and R, which enables me to efficiently manipulate data and apply advanced statistical techniques. I also specialize in data visualization to create clear, informative graphics that effectively communicate research findings to both technical and non-technical audiences. In addition to these skills, I lead comprehensive data reviews and analyses to generate high-quality deliverables and reports, ensuring they meet internal and external client requirements. I conduct rigorous peer reviews and quality control (QC) of data files, ensuring their accuracy and integrity before dissemination. Additionally, I automate and streamline data workflows using R, BASH, and SLURM to improve the efficiency of the analysis process.Looking ahead, I am committed to further developing my expertise in data analysis and visualization, continuing to build analytical workflows that promote high quality research. I have designed and maintained robust data visualization and transfer programs, ensuring seamless flow of critical insights across teams. I have also performed data reconciliation with external sources to ensure consistency and accuracy. In addition, I have developed custom data collection tools to improve project workflows and enhance data capture quality. By collaborating on the creation of standardized analytical tools, I have helped improve data management efficiency, boosting throughput and accelerating decision-making. I also have experience with Python, Shiny web app development, which broadens my technical capabilities. My goal is to integrate advanced computational methods with biological research to address complex questions, whether through automated pipelines, interactive web applications, or detailed RMarkdown reports. Ultimately, I aim to drive innovation and create tools that facilitate scientific discovery.
Buckeye Bodega Llc
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Manager Of OperationsBuckeye Bodega LlcFayetteville, Ar, Us
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Data ManagerCellcarta May 2023 - Nov 2024Montreal, Quebec, Canada• Developed and maintained automated data processing scripts for multiple clinical trial studies, ensuring efficient and accurate data handling across diverse projects.• Collaborated with data analysts to assess and validate data, managing and delivering high-quality data outputs and reports to meet both internal and external client requirements.• Designed and maintained data management scripts using R, Markdown, and GitHub, streamlining workflows and enhancing reproducibility in data analysis.• Authored and reviewed data transfer specifications to ensure compliance with both internal protocols and external client needs, ensuring seamless data exchange and integration.• Engineered and optimized data compilation, and transfer tools, improving the efficiency and accuracy of data reporting across projects.• Conducted peer reviews and quality control of data files, programs, and reports, ensuring high standards of accuracy, consistency, and reliability.• Performed data reconciliation across internal and external sources, identifying discrepancies and ensuring data integrity across systems.• Contributed to the development of standardized analytical tools, enhancing data management throughput and improving overall workflow efficiency for the team. -
Computational BiologistUniversity Of Arkansas Sep 2018 - May 2023Fayetteville, Arkansas, United States• Directed all aspects of two multi-year research projects on Diatom–Bacteria interactions, including designing workflows to analyze genetic and transcriptomic data from 200+ algal cultures and their associated bacteria. • Conducted genomic and transcriptomic analyses, leveraging statistical programming and bioinformatics tools (R, Python, SQL, Linux), and utilized phylogenetics software, microbiome analysis, and HPC via SLURM workload manager.• Communicated research findings through scientific articles, project reports, and conference presentations, producing high-quality figures with Adobe Illustrator, Photoshop, and R.• Reviewed and edited technical writing for multiple scientific publications, ensuring clarity and accuracy in presenting research insights.• Generated detailed project reports and analytical workflows using Jupyter notebooks, Markdown, and Quarto, maintaining code repositories on GitHub.• Achieved intermediate proficiency in Microsoft Excel and applied experience in statistical analysis and data visualization across various platforms.• Gained foundational experience in Shiny app development and big data handling with Apache Arrow.• Led the development and maintenance of analytical workflows, ensuring reproducibility and robustness in data processing pipelines. -
Teaching AssistantUniversity Of Arkansas Sep 2018 - May 2023Fayetteville, Arkansas, United States• Led human anatomy course instruction, designing and delivering engaging content to enhance student understanding of human structure and function.• Guided students through complex anatomical and physiological concepts, fostering a deeper comprehension of human biology.• Provided hands-on support during dissections, assisting students in mastering the techniques and ethical considerations of biological specimen analysis.• Conducted in-lab assessments using anatomical models and real biological specimens, ensuring a comprehensive and immersive learning experience.• Managed the delivery of over $900k in instructional services, grading assignments for more than 500 students, and maintaining high standards of academic excellence. -
Graduate Research Assistant / Jcu Cyanobacteria Collection CuratorJohn Carroll University Aug 2016 - May 2018University Heights, Ohio, United States• Led all aspects of two-year research project to determine the evolutionary relationships of rare terrestrial diatoms, employing molecular phylogenetics to uncover novel insights into their taxonomy and evolutionary relationships and resulting in a published manuscript.• Executed complex molecular techniques, including DNA extraction, PCR amplification, gel electrophoresis, and molecular cloning, to drive key findings in diatom research.• Cultivated and maintained hundreds of unialgal Cyanobacteria and diatom cultures, ensuring healthy, high-quality specimens for experimental studies.• Prepared specialized culture media (Z8 and WC) to support the growth and analysis of photosynthetic microalgae, optimizing conditions for diverse species.• Managed and updated a comprehensive culture collection database, streamlining data accessibility and ensuring accurate tracking of microbial cultures.• Leveraged advanced statistical programming in R and conducted spatial analyses with ArcGIS to interpret complex ecological data and visualize trends.• Proficient in data processing, management, exploratory analysis, statistical testing, and visualization, enabling effective communication of research findings and insights. -
Teaching AssistantJohn Carroll University Aug 2016 - May 2018University Heights, Ohio, United States• Led laboratory instruction for Principles of Biology I, II, and III, delivering dynamic and engaging hands-on experiences to students across multiple levels of biological study.• Facilitated interactive labs that reinforced core scientific concepts, nurtured critical thinking skills, and equipped students with practical expertise in biological research methodologies.• Emphasized the theory of evolution and provided in-depth coverage of biological diversity across all domains of life, ensuring students gained a comprehensive understanding of evolutionary principles.• Contributed over $300k in instructional services, managing grading and academic support for more than 90 students, while maintaining rigorous standards of academic excellence. -
Laboratory TechnicianEnviroscience, Inc. Jun 2014 - Aug 2016Stow, Ohio, United States• Performed species-level identification of diatoms, contributing to high-accuracy environmental assessments.• Identified macroinvertebrates, freshwater fish, and algal phyla to genus level, enhancing ecological data precision and biodiversity monitoring.• Utilized both plotless and plot-based sampling techniques, optimizing data collection methods for diverse aquatic environments.• Conducted comprehensive quantitative and qualitative collections of algal and macroinvertebrate samples, providing robust datasets for ecological analysis.• Applied short-term toxicity assessment methods to evaluate the chronic impact of effluents and receiving waters on freshwater organisms, ensuring environmental protection.• Prepared and analyzed soft algae and diatom samples for microscopic examination and applied the Utermöhl method to phytoplankton analysis for high-resolution data.• Analyzed key biological indicators including ash-free dry weight, ATP, and chlorophyll-a to assess ecosystem health and productivity.• Contributed to significant environmental assessments using bioindicators: - National Rivers and Streams Assessment (2013-2014): Supported nationwide water quality monitoring. - USGS Waukegan Harbor Phytoplankton and Zooplankton Assessment (2015): Assisted in aquatic ecosystem health evaluation. - Cleveland Hopkins Airport Biofilm Project (2014-2016): Investigated biofilm dynamics in urban water systems. -
Laboratory AssistantKent State University May 2012 - Aug 2012Kent, Ohio, United States• Led water quality experiments, designing and executing studies to assess key environmental parameters.• Performed precise analyses of chlorophyll-a, nitrogen, phosphorus, potassium, and pH levels to monitor ecosystem health and water quality.• Managed and maintained laboratory equipment, ensuring all tools were in optimal condition for consistent, reliable results.• Organized and maintained comprehensive records of experimental data, ensuring accuracy and easy retrieval for future analysis and reporting.
Cory Gargas, Ph.D. Education Details
Frequently Asked Questions about Cory Gargas, Ph.D.
What company does Cory Gargas, Ph.D. work for?
Cory Gargas, Ph.D. works for Buckeye Bodega Llc
What is Cory Gargas, Ph.D.'s role at the current company?
Cory Gargas, Ph.D.'s current role is Manager of Operations.
What is Cory Gargas, Ph.D.'s email address?
Cory Gargas, Ph.D.'s email address is co****@****rta.com
What schools did Cory Gargas, Ph.D. attend?
Cory Gargas, Ph.D. attended University Of Arkansas, John Carroll University, Kent State University.
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