Catherine Ross Email & Phone Number

• Pipeline Development & Engineering:
• Developed computational modules for NEOAG, a comprehensive neoantigen characterization pipeline.
• Engineered scalable Nextflow workflows and resolved containerization issues.
• Implemented best practices for modular package development and HPC optimization.Data Curation & Modeling:
• Established SQL databases and automated feature computation for immunogenicity prediction.
• Developed model comparison heuristics and centralized code repository for team collaboration.Tumor Mutation Analysis:

Toronto, Canada Area

• Genomics Data Analysis & Computational Pipeline Engineering:
• Engineered custom computational pipelines for analyzing human, mouse, and yeast genomes from diverse experiments.
• Developed and optimized CRISPR/Cas9 guide RNA libraries, enhancing experimental efficiency.
• Contributed to the publication of prestigious Nature articles and multiple successful grant proposals.Visualization & Tool Development:
• Created multiGIviewer, an interactive Shiny web application for visualizing genetic interaction data from CRISPR/Cas9 experiments.
• Released fedup, an R Bioconductor package for versatile pathway analysis, aiding in the interpretation of genomic datasets.

Toronto, Canada Area

• Annotated textual de-identified patient data for use in large machine learning projects
• Validated the clinical significance of AI algorithm predictions

Toronto, Canada

• Analyzed various cancer histology slides and tissue samples
• Developed and implemented histological quality control procedures
• Prepared reports and presentations for the molecular pathology team

Master Of Science (Msc), Molecular Genetics

▪ Areas of concentration: Genetics, evolution, bioinformatics, statistics ▪ Thesis: Detecting signals of Coevolution within Immune.

Bachelor Of Health Sciences (Bhsc), Health Sciences

▪ Areas of Concentration: Anatomy and physiology, medical genetics, molecular biology ▪ Honours Thesis: The association between body-mass.