Chen Zhao Email and Phone Number
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Ph.D. in electrical and computer engineering. 12+ years experience in machine learning and bioinformatics. 10+ years experience in developing clinical grade NGS tests in both NIPT and Oncology. Strong analytical and programming skills. Interested in building algorithms and predictive models to interpret large scale biological data.
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Chapter Lead, Head Of Computational Biology, Molecular Lab ApplicationsRoche Sep 2022 - PresentSwitzerland 🇨🇭 , Ch- Lead multiple bioinfo & SW teams for molecular applications (infectious disease, NIPT, oncology, Avenio, Kapa reagent, CLIA lab) and new sequencing platform development -
Director Of Bioinformatics, OncologyIllumina Dec 2021 - Sep 2022San Diego, Ca, Us- Oversee Oncology bioinformatics research & development at Illumina, including tissue biopsy, liquid biopsy, CDx programs, pharma collaboration, biomarker discovery.- Lead TSO500 bioinfo development, CEVID & IVD submission. -
Associate Director, BioinformaticsIllumina Jul 2020 - Dec 2021San Diego, Ca, Us- Lead DRAGEN biomarker development - TMB, MSI, HLA, HRD etc- Lead bioinfo validation studies for CovidSeq FDA submission - the first FDA EUA approval for NGS based Covid19 detection (plus mutation detection and consensus genome generation). The test is broadly used for virus lineage tracking.- Hired and managed a team of ~20 bioinfo scientists -
Sr. Manager, Bioinformatics, Clinical GenomicsIllumina Aug 2018 - Jun 2020San Diego, Ca, Us- Three times Illumina Value Award for major contributions to tissue and liquid biopsy product development and academia collaborations- Bioinfo lead for TruSight Oncology 500 RUO and IVD development - a 500+ gene panel to enable targeted therapy and immuno-oncology related applications (RUO launched in Jan 2019)- Bioinfo lead for TruSight UMI toolkit - ultra sensitive variant detection in ctDNA samples (product launched in April 2018) -
Manager, Bioinformatics, Clinical GenomicsIllumina Dec 2016 - Aug 2018San Diego, Ca, Us-Algorithm and pipeline development for Illumina's ctDNA assay-Key contributor for TruSight Tumor 170 (development of tumor only FFPE CNV calling, execution of DVT studies, etc) -
Bioinformatics Scientist 2Illumina Sep 2014 - Nov 2016San Diego, Ca, Us -
Bioinfo Scientist 1, 2 And Sr Bioinformatics ScientistSequenom Laboratories Jun 2012 - Sep 2014San Diego, Ca, Us-Main developer for genome wide microdeletion (>=5Mb) detection in NIPT (first ever commercial test on market)-Designed a suite of algorithms that extended MaterniT21™ PLUS test to cover 6 additional microdeletion syndromes (product launched in October 2013)-Bioinformatics support for NGS data normalization and interpretation-Drafted 4 patent applications and published 4 high impact journal articles -
Intern And Research FellowTgen Jan 2011 - Jun 2012Phoenix, Az, Us-Developed a classification pipeline for high throughput protein biomarker discoveries-Developed a Java tool for peptide quantification using extract ion chromatograms. Reduced computation time by up to 10 fold compared to vendor software-Modeled cell line's gene expression dynamics after drug treatment using high throughput green fluorescent protein technology-Developed a novel time series data alignment algorithm to identify mechanistic similarities among anti-cancer drugs. The algorithm achieved 97% accuracy under real experimental conditions -
Research AssistantTexas A&M University Jun 2008 - Jan 2011College Station, Tx, Us-Identified potential biomarkers for patients at high risks for colon cancer using microarray gene expression data-Established the theoretical relationship between prior biological knowledge and the accuracy of classification results-Developed a method to detect master genes in Bayesian networks and successfully applied the method to real biological networks
Chen Zhao Skills
Chen Zhao Education Details
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Texas A&M UniversityElectrical And Computer Engineering -
Texas A&M UniversityElectrical And Electronics Engineering -
Beijing University Of Posts And TelecommunicationsTelecommunication Engineering
Frequently Asked Questions about Chen Zhao
What company does Chen Zhao work for?
Chen Zhao works for Roche
What is Chen Zhao's role at the current company?
Chen Zhao's current role is Head of Computational Biology - Molecular Lab Applications @ Roche.
What is Chen Zhao's email address?
Chen Zhao's email address is cz****@****ina.com
What schools did Chen Zhao attend?
Chen Zhao attended Texas A&m University, Texas A&m University, Beijing University Of Posts And Telecommunications.
What skills is Chen Zhao known for?
Chen Zhao has skills like Genomics, Bioinformatics, Statistics, Pattern Recognition, R, Matlab, Java, C, Next Generation Sequencing, Machine Learning, Time Series Analysis, Proteomics.
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