David Toole Email and Phone Number
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David Toole is a Genomic Data Management at Merck.
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Technical AnalystMerck Sep 2022 - Present -
Technical AnalystMerck Jan 2020 - Sep 2022West Point, PaContracted by Atlas Data Systems
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Graduate Research AssistantUniversity Of Florida Aug 2017 - Dec 2019Immokalee, Fl• Assisted in building a bioinformatics pipeline for analysis of 16S-rRNA and ITS-1 sequenced datasets.• Analyzed data from several ongoing projects, running statistics and data visualization in R.• Helped other lab members with troubleshooting errors in their data analyses.• Actively sought and evaluated various bioinformatics tools for use in the lab. -
Adjunct InstructorJuniata College Jan 2017 - May 2017Huntingdon, Pa• Taught an introductory biology course (toxicology) to about 30 first-year college students.• Was responsible for leading/coordinating with the team of TAs to ensure the exercises for the day were prepared.• Effectively presented the course material in an approachable way so that new students could readily understand.• Held additional office hours outside of class for students to get one-on-one help if they needed it. -
Genomics ConsultantJuniata College Sep 2016 - May 2017Huntingdon, Pennsylvania• Assisted with software installation and general maintenance of the HPC cluster.• Held sessions for students who were running into errors or needed general guidance to help advance their bioinformatics-related projects.• Helped with department-wide tasks, such as using an autoclave to sterilize pipette tips and culturing media.• On call for lab sessions requiring an extra person knowledgeable about the HPC cluster for help with troubleshooting.
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Teaching AssistantJuniata College Feb 2016 - Dec 2016Huntingdon, Pa• Worked as a TA for four biology lab courses that taught microbiology and genomics research techniques.
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Undergraduate Research AssistantJuniata College Jun 2014 - Aug 2016Huntingdon, Pa• Functioned as a peer leader in the lab and helped other students with troubleshooting their data analyses, implementing new analysis tools, and advising how to approach a given research project.• Heavily involved with the creation and maintenance of several analysis pipelines and tutorials for students to use when starting to analyze their own data.• Functioned as a TA for the GCAT-SEEK HHMI workshop held at Juniata College.• Participated in several oral and poster presentations to communicate my own projects to scientific and non-scientific audiences.• Work done during time with this lab has led to authorship on five peer-reviewed publications ranging from determining impacts of Superstorm Sandy on aquatic microbial community structure to assessing how Clostridium difficile infection shifts the gut microbial community structure aside from the abundance of C. difficile alone.
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Biology TutorJuniata College Feb 2016 - May 2016Huntingdon, Pa• Tutored a student to help with understanding bioinformatics concepts taught in an intermediate-level biology course and associated lab modules.
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Bioinformatics ConsultantWright Labs Aug 2016 - May 2017Huntingdon, Pa• Analyzed multiple high-throughput amplicon data sets for clients using programs such as QIIME, R-phyloseq, Trimmomatic, LefSe, CoNet (Cytoscape plugin), and PICRUSt.• Created Python scripts to solve various issues including header mismatches, large metadata merging, and detection of erroneous sequencing data.• Helped develop and maintain the company's main analysis pipelines for the 16S-rRNA and the fungal ITS-1 amplicons. -
Undergraduate Research InternBerkeley Lab Jun 2015 - Aug 2015Berkeley, Ca• Used shotgun-sequenced data to analyze the functional metagenomic potential of microbes found in permafrost soil samples.• Presented findings in a closing poster presentation held at LBNL.
David Toole Education Details
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Microbiology
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Bioinformatics
Frequently Asked Questions about David Toole
What company does David Toole work for?
David Toole works for Merck
What is David Toole's role at the current company?
David Toole's current role is Genomic Data Management.
What is David Toole's email address?
David Toole's email address is da****@****rck.com
What schools did David Toole attend?
David Toole attended University Of Florida, Juniata College.
Who are David Toole's colleagues?
David Toole's colleagues are Andrew Robbins, Karine Lacroix, Cpa, Steeve Victoire, Cianna L. Cooper, Iris L., Paige Brackett, Ann Nduta.
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