Daniel Osorio Email & Phone Number

Venlo, Limburg, Nl

Boston, Ma, Us

- Provided expert computational support services to Boston Children's Hospital scientists and clinicians, utilizing a diverse range of bioinformatics tools, methods, and technologies to analyze complex next-generation sequencing data, including RNA-seq, ChIP-seq, ATAC-seq, Cut+Run/Tag, single-cell/nuclei RNA-seq, and single-cell ATAC-seq.- Designed and built robust pipelines for data analysis, integration, and sharing, optimizing workflows for diverse data types, resulting in streamlined and reproducible analysis processes.- Demonstrated strong expertise in maintaining and upgrading research computing tools, methods, and technologies, including data migration and documentation of changes, ensuring up-to-date and efficient data analysis processes.- Proactively adjusted internal operation procedures to optimize efficiency, reproducibility, and effectiveness of data analysis workflows, resulting in improved productivity and accuracy of results, while consistently meeting deadlines and completing assignments within the required timeframe with minimal supervision.- Provided technical guidance and support to researchers and trainees on data analysis, statistical methods, and computational tools.

Austin, Tx, Us

- Conducted advanced and in-depth data analysis on complex data sets in the field of cancer genomics, CRISPR screens, single cell and next-generation sequencing analysis, utilizing diverse bioinformatics tools and algorithms to derive novel and meaningful insights. - Developed cutting-edge tools and algorithms for data processing, quality control, and data visualization, including an innovative R package for reconstructing transcriptome-wide gene regulatory networks optimized for population-level studies.- Identified pivotal genetic and epigenetic biomarkers for cancer precision medicine, playing a critical role in the development of targeted therapies and personalized treatment strategies, contributing to advancements in cancer treatment prioritization. - Utilized cutting-edge data mining and advanced statistical analysis methods to uncover significant patterns and trends in large-scale single-cell RNA-seq data related to cancer, providing key insights into cancer biology and potential therapeutic targets.- Collaborated extensively with interdisciplinary teams of renowned researchers, oncologists, and biologists to provide data-driven insights and recommendations for cutting-edge cancer research projects, fostering collaborative and interdisciplinary approaches to cancer research.

Oslo, Oslo, No

- Developed two R packages leveraging bioinformatics techniques: one generates accurate disease-specific response signatures from LINCS-L1000 data, enabling analysis of large-scale molecular data in the context of drug response profiles. The second package facilitates seamless download and merging of labeled single-cell RNA-seq data from PanglaoDB, enhancing analysis capabilities for complex biological data.- Co-authored multiple high-impact research papers reporting cutting-edge research in cancer biology and precision medicine.- Successfully secured a Familien Blix Fond Til Fremme Av Medisinsk Forskning funding of NOK\$ 50,000.- Demonstrated excelent problem-solving skills, strong ability to work independently, and strict adherence to best practices and standards in research, contributing to the successful completion of research projects within set timelines, and ensuring accuracy and rigor.

College Station, Tx, Us

- Developed a family of tools that use state-of-the-art machine learning algorithms to construct and compare gene regulatory networks from single-cell data and predict gene function in a context-specific manner.- Designed and implemented research projects, including experimental design, data collection, analysis, and interpretation, using advanced genomic and bioinformatic techniques.- Published research findings in peer-reviewed journals and presented research results at scientific conferences.- Collaborated with other researchers and faculty members in the department and in interdisciplinary settings to advance knowledge in the field of biomedical genomics and bioinformatics.- Acquired and maintained expertise in relevant research techniques, including genomics, transcriptomics, and statistical analysis.- Assisted faculty members in the development and delivery of graduate courses in biomedical genomics and bioinformatics.- Received a Graduate Student Research Trainee Grant (USD$ 5,000) and a Marie Sklodowska-Curie Postdoctoral Scientia II Fellowship to perform independent research and continue training as a postdoctoral fellow in Dr. Marieke Kuijjer's Lab at the Centre for Molecular Medicine Norway (NCMM), respectively.

Bogotá, Cundinamarca, Co

Doctor Of Philosophy - Phd, Biomedical Sciences

Master Of Science - Ms, Bioinformatics

Bachelor Of Science - Bs, Biology, General