I am a computational biologist working to understand the structure-function basis of complex nucleic acid systems and RNA-Protein complexes with a specific interest in non-coding RNAs using database development, software development, structural modelling and molecular dynamics simulation approaches that span biological events occurring in time and length scales. My research experience in Genome-Informatics of non-coding RNAs involves algorithmic development and subsequent data analysis. By employing various computational tools, I have evaluated the functional consequences of variations on various human non-coding RNAs. I deliver constant effort to acquire knowledge of current industry trends and I am an expert in clearly communicating complex topics to diverse audiences.Area of expertise: Molecular Dynamics Simulation, Structural Modeling, Database Development, Software Development, Bioinformatics, NGS Data Analysis, small RNA Seq, ChIP Seq, RNA Biology;Strong experience in Unix/Linux platforms; Experienced in programming and scripting languages: Fortran77, C, Perl, Python, bash scripting, shell commands;Web programming: CGI-Perl, PHP, JavaScript, jquery;Database: MySQLStatistics & Data plotting software: RAcademic profile : https://orcid.org/my-orcid?orcid=0000-0002-0158-0700
-
BioinformaticianCecad CologneCologne, Nrw, De
-
BioinformaticianCecad Cologne Apr 2023 - PresentCologne, North Rhine-Westphalia, Germany-- nf-core-- renv-- Docker-- {targets} R package development for analysis-- RNA-Seq, scRNA-Seq Analysis -
Postdoctoral ResearcherInstitute Of Molecular Biology (Imb) Mar 2019 - Feb 2023Mainz Area, Germany- - Development, implementation and analysis of novel nucleotide modifications in DNA and RNA.- - Integration and analysis of multiple -omics datasets (ChIP-Seq, RIP-Seq, DIP-Seq, smRNA-seq, total RNA-seq, BS-Seq).- - Strategy development for NGS experiment design.- - Custom script development for sequencing data analysis. -
Senior Research FellowSaha Institute Of Nuclear Physics Aug 2012 - Feb 20191/Af Bidhannagar- - Software Development for Nucleotide structure parameter calculation.- - Database development.- - Software and webserver development for RNA structural modelling.- - Molecular Dynamics simulation of RNA molecules for structure-based studies.- - Supervision of a master's student.- - Independent collaboration with researchers outside the group. -
Project AssistantIgib Sep 2011 - Aug 2012New Delhi Area, India- - small RNA seq analysis for the project of RNA editing in miRNAs. -
Summer TraineeIndian Institute Of Science May 2010 - Jul 2010Bangalore- - Codon usage analysis for bacterial protein HU
Dr. Debasish Mukherjee Education Details
-
Bioinformatics & Biophysics -
Zoology(Hons.) -
Kandi Raj HighschoolSecondary And Higher Secondary
Frequently Asked Questions about Dr. Debasish Mukherjee
What company does Dr. Debasish Mukherjee work for?
Dr. Debasish Mukherjee works for Cecad Cologne
What is Dr. Debasish Mukherjee's role at the current company?
Dr. Debasish Mukherjee's current role is Bioinformatician.
What schools did Dr. Debasish Mukherjee attend?
Dr. Debasish Mukherjee attended University Of Calcutta, Recruitment, Kandi Raj Highschool.
Not the Dr. Debasish Mukherjee you were looking for?
Free Chrome Extension
Find emails, phones & company data instantly
Aero Online
Your AI prospecting assistant
Select data to include:
0 records × $0.02 per record
Download 750 million emails and 100 million phone numbers
Access emails and phone numbers of over 750 million business users. Instantly download verified profiles using 20+ filters, including location, job title, company, function, and industry.
Start your free trial