Fedde Schaeffer Email & Phone Number

Utrecht, Netherlands

Amsterdam Area, Netherlands

Trainee in the Life Sciences group. Assisted in the development of a pipeline for integrative network analysis of gene expression data in the form of a Cytoscape app. Part of my MSc programme at VU University Amsterdam.

Utrecht Area, Netherlands

Trainee in Edwin Cuppen’s lab. Studied intronic expression in SOLiD RNA-Seq data of rats. Part of my MSc programme at VU University Amsterdam.

Occasionally contacted to co-operate in short-term IT jobs for clients of OGD (third-party companies/organisations).

Part-time holiday job, developing a web application using the Python framework Django for an education/popularisation project at the Human Genetics department.

Rotterdam Area, Netherlands

Trainee at the Experimental Urological Research Laboratory, as a part of my bachelor’s programme at Hogeschool Leiden. Evaluated methods for microarray-based co-expression analysis to investigate regulation of potential novel prostate cancer biomarker transcripts.

Assisted in the development of a new LIMS system for keeping track of next-gen sequencing tasks at the Human Genetics department/Leiden Genome Technology Centre (LGTC).

Trainee at the human genetics department, as a part of my bachelor’s programme at Hogeschool Leiden. Evaluated short-read sequencing software for fitness to a research programme involving variant calling based on Illumina sequencing of DNA.

Master Of Science (Msc), Bioinformatics / Systems Biology

Bachelor Of Applied Science (Basc), Bioinformatics

Activities and Societies: Study association EXON Won the award for the third-best final thesis at Hogeschool Leiden in HL-Prijs 2012.