Mark Jensen Email & Phone Number

Rockville, MD, US

Frederick, Maryland, US

Frederick, Maryland, US

I provide program leadership in data architecture and software development, supporting the Cancer Research Data Commons, an initiative of the National Cancer Institute's (NCI's) Center for Biomedical Informatics and Information Technology (CBIIT), as well as the Cancer Moonshot(sm) Biobank for the NCI's Biorepositories and Biospecimen Research Branch.

Frederick, Maryland, US

I was part of the senior leadership team managing the design, maintenance, and ongoing development of a major cancer genomic data resource, the Genomic Data Commons (GDC).[ The FNLCR is operated by Leidos Biomedical Research, Inc. on behalf of the NCI. ]Highlights:Developed ongoing close working relationships with cancer genomics experts nationally and.

US

Fortinbras Research provides its clients custom bioinformatics code and applications.Highlights:Developed and continue to maintain http://spatyper.fortinbras.us, the only freely available web-based Staphylococcus aureus spa typing (molecular epidemiology) application;Developed and maintain Perl object bindings to the Neo4j graph database REST interface.

Falls Church, VA, US

I was the project manager of The Cancer Genome Atlas Data Coordinating Center (TCGA DCC), National Cancer Institute, National Institutes of Health.Highlights:Provided project and personnel management for a 12-member team of PhD/MS bioinformatics scientists, software engineers and software and process quality personnel for this high-visibility, high-usage.

Falls Church, VA, US

Lead bioinformatics scientist in support of the Data Coordinating Center of the The Cancer Genome Atlas, National Cancer Institute, National Institutes of Health.Duties:Day-to-day management of 7-member PhD/MS level bioinformatics team;Management of custom, enterprise-level software and data format specification, development and.

Falls Church, VA, US

Senior-level bioinformatics scientist in support of the Data Coordinating Center of the The Cancer Genome Atlas, National Cancer Institute, National Institutes of Health.Duties:Supervision of TCGA data and metadata submissions from consortium participants and assisting in submission and database quality assurance for multiple high-throughput.

Falls Church, VA, US

I organized and facilitated high-quality scientific review of research proposals for the Breast Cancer Research Program of the Congressionally Directed Medical Research Program, a process involving reviewer recruitment, proposal assignment, meeting organization, and post-review documentation.

Vancouver, British Columbia, CA

I worked with Dr Richard Harrigan and the CFE Clinical Laboratories, doing bioinformatics research and software development for the analysis of ultra-deep HIV sequencing.

Athens, GA, US

Assistant Professor of Genetics and Epidemiology

Atlanta, GA, US

As a postdoctoral fellow at Emory University in the lab of Bruce Levin, I developed and analyzed a mathematical model of cholera epidemics that involved the interactions between the cholera bacteria, the human population, and bacterial viruses to which the cholera bacterium is susceptible. (see the paper; PubMed ID:16537404)I also developed and implemented.

Seattle, WA, US

While studying the pathogenesis and evolution of HIV at the University of Washington, I:* designed and performed computational biological research on within-patient HIV-1 molecular evolution and its relationship to HIV disease progression and prognosis. This work included aspects of HIV pathogenesis and rational vaccine design;* designed, coded and.

Phd, Molecular Evolution

Fulbright Scholar, Mathematics

Msc, Mathematics

B.S., Mathematics