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Stéphanie Feupé, Ph.D. Email & Phone Number

Bioinformatics &Biomedical Informatic Scientist at Ambry Genetics
Location: United States, United States, United States 10 work roles
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Current company
Ambry Genetics
Role
Bioinformatics &Biomedical Informatic Scientist
Location
United States, United States, United States
Company size
644 employees

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Stéphanie Feupé, Ph.D. is listed as Bioinformatics &Biomedical Informatic Scientist at Ambry Genetics, a company with 644 employees, based in United States, United States, United States. AeroLeads shows a matched LinkedIn profile for Stéphanie Feupé, Ph.D..

Stéphanie Feupé, Ph.D. previously worked as Boinformatcis Scientist II at Ambry Genetics and Postdoctoral Research Fellow at La Jolla Institute For Immunology.

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Ambry Genetics

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About Stéphanie Feupé, Ph.D.

eQTLs have elucidated association between variants and gene expression, and thus some diseases and traits; but the mechanisms underlying such association are not well understood. As a postdoctoral researcher I use genotyping data and related NGS, single cell epigenetic and transcriptomic data to better elucidate the role and/or underlying mechanism of gene regulation by genetic variants.

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Stéphanie Feupé, Ph.D.'s current company

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Ambry Genetics
Ambry Genetics
Bioinformatics &Biomedical Informatic Scientist
aliso viejo, california, united states
Website
ambrygen.com
Employees
644
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10 roles · 15 years

Stéphanie Feupé, Ph.D. work experience

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Boinformatcis Scientist Ii

Current
Ambry Genetics

Aliso Viejo, California, United States

Supporting Pharma clients by providing customized solutions. Supporting new product validation.Supporting pipeline creation and improvements.

Mar 2021 - Present

Postdoctoral Research Fellow

La Jolla Institute For Immunology

La Jolla

Ferhat Ay Lab, LJI* Investigating the role of genome compaction in gene regulation through eQTL mapping and allele-specific analysis of gene expression and 3D genomic data like HiC and HiChIP. * Integrating allelic imbalance in eqtl analysis can improve eqtl fine mapping. * Integration of H3K27ac mediated HiChIP interaction data in functional analysis of.

Jan 2019 - Feb 2021

Phd Candidate

University Of California, San Diego - Jacobs School Of Engineering

Greater San Diego Area

My research involved the identification, analysis and characterization of expression short tandem repeats (eSTRs) across tissues using GTEx data. We built a catalog of eSTRs (short tandem repeats that influence gene expression) from GTEX data; expanding the pool of candidate variants in clinical screening.Gymrek lab @ UC San Diego

Jun 2016 - Dec 2018

Phd Graduate Student - Research Assistant

University Of California San Diego

La Jolla

* Investigated influence of genetic variants such as SNPs, multi allelic variants, on various phenotypes including rare diseases pedigree.* Used a GATK-based pipeline for variants calling and filtering to identify candidate variants from whole genome sequencing (WGS/DNA-seq) from trios and quartets with children suffering from rare diseases.* Subsequently.

Sep 2013 - Dec 2018

Teaching Assistant

University Of California San Diego

La Jolla

CS185: Advanced Bioinformatics Labs Teaching:Hands-on application of bioinformatics to biological problems using existing tools.Combining approaches to answer specific biological questions. Next Generation Sequencing, genetic data, sequence alignment, comparative genomics, expression analysis, genome-wide association studies and using big data

Apr 2018 - Jul 2018

Teaching Assistant

University Of California San Diego

La Jolla

MED 264: Teaching:Introduction to the field of biomedical informatics.Exploring the nature of biomedical information and their use in patients care and population study. Hands on projects to engage students in the current healthcare research environment

Sep 2015 - Dec 2015

Teaching Assistant

University Of California San Diego

La Jolla

MED 264: Teaching:Introduction to the field of biomedical informatics.Exploring the nature of biomedical informatics, its use in patients care and population study. Hands on projects to engage students in the current healthcare research environment, highlighting integration of genetic research..

Sep 2014 - Dec 2014

Research Analyst Iii

University Of California, San Diego - School Of Medicine

Department Of Medicine, Division Of Biomedical Informatics, UCSD

* Responsible for the design, creation and maintenance of a database that meets both project DMITRI (Diabetes Integrated Technology Research Initiative) and team (IDASH) requirements. * Data integration, sharing, and analysis toward personalizing diabetes care. Statistical analysis of large data sets (time series) using Matlab time series tool, Excel..

Mar 2012 - Sep 2013

Bioinformatics Consulting

Statigrafix

Exploratory research

2011 - 2012 ~1 yr

Research Assistant

San Diego State University

SNP detection tools assessment. Assessment and comparison of different software and applications addressing SNPs and InDels discovery.

Sep 2010 - 2011
Team & coworkers

Colleagues at Ambry Genetics

Other employees you can reach at ambrygen.com. View company contacts for 644 employees →

HC Holle Cloutier Holle Cloutier Colleague at Ambry Genetics Greater Houston, United States View → KG Krystle Gallardo Krystle Gallardo Colleague at Ambry Genetics Aliso Viejo, California, United States, United States View → AH Amy Hammond Amy Hammond Colleague at Ambry Genetics Laguna Beach, California, United States, United States View → EC Elizabeth Chocoteco Elizabeth Chocoteco Colleague at Ambry Genetics Costa Mesa, California, United States, United States View → MM Michele Mauro Michele Mauro Colleague at Ambry Genetics Rancho Santa Margarita, California, United States, United States View → NN Neeru N Neeru N Colleague at Ambry Genetics Jersey City, New Jersey, United States, United States View → HS Heidi Sanderson Heidi Sanderson Colleague at Ambry Genetics Greater Seattle Area, United States, United States View → GH Garrett Holt Garrett Holt Colleague at Ambry Genetics Knoxville, Tennessee, United States, United States View → YL Ying Li Ying Li Colleague at Ambry Genetics Irvine, California, United States, United States View → TL Tracey Leedom Tracey Leedom Colleague at Ambry Genetics Durham, North Carolina, United States, United States View →
FAQ

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What company does Stéphanie Feupé, Ph.D. work for?

Stéphanie Feupé, Ph.D. works for Ambry Genetics.

What is Stéphanie Feupé, Ph.D.'s role at Ambry Genetics?

Stéphanie Feupé, Ph.D. is listed as Bioinformatics &Biomedical Informatic Scientist at Ambry Genetics.

Where is Stéphanie Feupé, Ph.D. based?

Stéphanie Feupé, Ph.D. is based in United States, United States, United States while working with Ambry Genetics.

What companies has Stéphanie Feupé, Ph.D. worked for?

Stéphanie Feupé, Ph.D. has worked for Ambry Genetics, La Jolla Institute For Immunology, University Of California, San Diego - Jacobs School Of Engineering, University Of California San Diego, and University Of California, San Diego - School Of Medicine.

Who are Stéphanie Feupé, Ph.D.'s colleagues at Ambry Genetics?

Stéphanie Feupé, Ph.D.'s colleagues at Ambry Genetics include Holle Cloutier, Krystle Gallardo, Amy Hammond, Elizabeth Chocoteco, and Michele Mauro.

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