Jack Freeman Email & Phone Number

Madison, Wisconsin, United States

- Develop, implement, and optimize bioinformatics pipelines for single-cell RNA sequencing (scRNA-seq) and Assay for Transposase-Accessible Chromatin using sequencing (ATAC-seq).- Perform core and downstream analysis of scRNA-seq and ATAC-seq data, including quality control, normalization, clustering, differential expression analysis, and integration of.

Waterville, Maine, United States

• Facilitated the development of biology students
• Assisted with lab preparation and instruction

Baltimore, Maryland, United States

• Developed a multi-omics non-specific cancer prediction model in R using logistic regression
• Worked to minimize misclassifications in the cancer prediction setting
• Learned to clean, analyze and visualize genomic and proteomic data

East Boothbay, Maine, United States

• Constructed a plasmid for the expression of the SARS-CoV-2 spike protein in a vaccine candidate
• Became experienced with PCR, Gibson assembly, colony analysis and gel electrophoresis
• Collaborated with an NSF-funded research team to test the viability of vehicles for gene transport
• Designed primers and performed genomic analysis in the software SnapGene