Jacob Nye Email & Phone Number

New York, NY, US

New York, NY, US

• Ph.D. Candidate in the BME Department at Columbia University
• Co-advised by Dr. Alex Dranovsky and Dr. Andrew Laine

New York, New York, US

• Led task of designing and deploying polyp (tumor) detection algorithm for flagging cancerous and precancerous areas in the colon for the physician during colonoscopy based on 32 gastroenterologist's feedback from NSF.
• Trained SegNet CNN with ResNet-50 backbone to classify and localize polyps from colonoscopy videos
• Extracted, cleaned, and preprocessed images from colonoscopy databases using OpenCV, NumPy, and SciPy

Chicago, IL, US

• Programmed custom NLP-based tools for automating the extraction of cancer type and histology from clinicaltrials.gov
• Developed Tensorflow BoostedTree machine learning models for predicting whether a clinical trial would meet its enrollment goal and performed feature engineering using custom SQL queries and Pandas library
• Styled Tempus clinical trials web-app using React and JavaScript

New York, NY, US

• Designed and built a custom experimental apparatus for 2-bottle taste preference test using Arduino, a custom MATLAB GUI, and capacitive lick sensor. Assembled into high-throughput behavioral boxes for testing 18 mice.
• Conducted hunger and thirst brain-circuit research with transgenic mice and optogenetics
• Programmed analysis software for fiber photometry data replicating best practices and version controlled with GitHub

Landover, MD, US

I organized career-planning events, such as talks from representatives of biotech companies, meetings with Biomedical Engineering faculty, journal clubs, and an engineering hardware hackathon for undergraduate Biomedical Engineering students at Columbia.

Landover, MD, US

• Cofounded Columbia's first healthcare hackathon, HealthHacks, in partnership with the HTA, IBM Watson, and ST Micro. More info about the size and scope of the event can be found at healthhacks.nyc
• Planned and organized Columbia Maker Space Introduction to Biotech workshop. Demonstrated how the Maker Space can be used to assist with hacking projects and taught soldering skills. Facilitated introduction to Arduino.

Landover, MD, US

• Designed comprehensive judging guidelines and checklist for biomedical section of Columbia’s annual hardware hackathon Make CU. Contacted companies for hackathon sponsorship

-Planned and ran an Introduction to Neurohacking workshop in collaboration with the Columbia Maker Space where a brief intro to the field was given before live-demos with backyard brain kits. There were over 20 new people trained and registered with the Maker Space as a result of the workshop.-Brainstormed part of the curriculum for Zuckerman Insitute.

Martinez, CA, US

• Conducted data entry to help track distribution of water in district.
• Increased, as part of a team, average amount of cars served daily from approximately 200 to 500 by streamlining distribution process, increasing staff, and expanding number of available pumps.
• Maintained and improved grounds by painting power stations, tree installation, and ground upkeep.

Walnut Creek, California, US

• Greeted customers, took orders, and handled transactions at one of Northern California’s busiest lunch destinations.
• Consistently completed orders and interactions with customers under the target of 2 minutes or less per sandwich.
• Received perfect score on training test following completion of employee onboarding program.

Master'S Degree, Bioengineering And Biomedical Engineering

Bioengineering And Biomedical Engineering

Education record