James Ko

James Ko Email and Phone Number

Bioinformatics Engineer at Memorial Sloan Kettering @ Memorial Sloan Kettering Cancer Center
new york, new york, united states
James Ko's Location
New York, New York, United States, United States
James Ko's Contact Details

James Ko work email

James Ko personal email

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About James Ko

James Ko is a Bioinformatics Engineer at Memorial Sloan Kettering at Memorial Sloan Kettering Cancer Center. Colleagues describe him as "James is a valuable contributor to CoreFX repository. Over the last 2 years, he's made hundreds of code changes used by .NET Core applications around the world. After he joined the project in 2015, he quickly became the third most active non-Microsoft contributor to our project, which is a really great achievement. His contributions varied from bug fixes, new tests, trough addition of new APIs, to significant perf improvements of core data structures (e.g. 2x perf improvement in common Linq scenarios). He also helped to drive consensus on a low-level HashCode API, moderating discussion between several architects and contributors. Overall James has very solid coding and engineering skills. He can focus on delivering value for product and demonstrated growth in understanding bigger picture (incl. why not every improvement is worth the effort / maintenance cost). He is passionate about performance of frameworks and APIs. He has excellent communication skills. Based on his contributions, we worked with James together to pick a larger project for him in Roslyn Analyzers, with closer mentorship from Microsoft engineer on Roslyn team."

James Ko's Current Company Details
Memorial Sloan Kettering Cancer Center

Memorial Sloan Kettering Cancer Center

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Bioinformatics Engineer at Memorial Sloan Kettering
new york, new york, united states
Website:
mskcc.org
Employees:
15120
James Ko Work Experience Details
  • Memorial Sloan Kettering Cancer Center
    Bioinformatics Engineer
    Memorial Sloan Kettering Cancer Center Jun 2023 - Present
    New York, New York, United States
    Build and demonstrate ETL pipeline from Cancer Research Data Commons (CRDC) to cBioPortal cancer visualization platform under joint collaboration with National Cancer Institute (NCI), Institute for Systems Biology (ISB), and Leidos, making data accessible to thousands of researchers. Extract clinical and genomics data from CRDC via Google BigQuery database and convert to format usable by cBioPortal. Help integrate data pipeline with Apache Airflow to achieve robust error reporting and task parallelization. Work with backend technologies including Python, SQL, Google BigQuery, Apache Airflow, and Pandas.
  • Massachusetts General Hospital
    Software Engineer
    Massachusetts General Hospital Oct 2022 - Jun 2023
    Boston, Massachusetts, United States
    Managed data for DISCOVERY and MarkVCID studies on cognitive impairment and dementia, with goal of developing effective biomarkers and personalized medicine for patients. Created weekly reports summarizing DISCOVERY site enrollment statistics and upload rates for researchers, helping to identify sites lagging in data uploads. Collected and anonymized clinical form data for MarkVCID1 into spreadsheets, enabling researchers outside consortium to conduct data analyses. Gained experience with backend technologies such as Python, CouchDB, Bash, and Cron.
  • Boston Children'S Hospital
    Research Intern
    Boston Children'S Hospital May 2021 - May 2022
    Boston, Massachusetts, United States
    Worked with Harvard Medical School doctor to build PyTorch machine learning model to predict biomarkers of neurological conditions such as Alzheimer's disease and schizophrenia. Helped other interns integrate model into projects studying effects of COVID-19 on brain aging and congenital heart disease. Wrote scientific paper analyzing effect of data imbalance and sample size on model performance and submitted for review to NeuroImage.

James Ko Education Details

Frequently Asked Questions about James Ko

What company does James Ko work for?

James Ko works for Memorial Sloan Kettering Cancer Center

What is James Ko's role at the current company?

James Ko's current role is Bioinformatics Engineer at Memorial Sloan Kettering.

What is James Ko's email address?

James Ko's email address is ja****@****tal.org

What schools did James Ko attend?

James Ko attended University Of Massachusetts Amherst.

Who are James Ko's colleagues?

James Ko's colleagues are Shane Mayack, Krapf Ronald, Kelechi Nwaoha, Gideon Ahwireng, Mahsa Vahdatinia, Ewebiyi Pelumi, Jules Johnson.

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