John Penn

John Penn Email and Phone Number

Accomplished thought leader in Biological Data Analytics and Computational Biology @ Karyopharm Therapeutics Inc.
John Penn's Location
New York City Metropolitan Area, United States, United States
John Penn's Contact Details

John Penn personal email

About John Penn

Dynamic team leader with a strong technical background and extensive expertise in cloud-based computational analysis of genomic data. Recognized as a thought leader in the utilization of "omics" data at the Regeneron Genetics Center, the most prolific sequencing center globally. Led a team that became the world experts in high-throughput sequencing, driving strategic and tactical business goals and effectively collaborating with external partners. Adept at communicating complex technical concepts to diverse stakeholders and influencing research-driven departments across the organization.

John Penn's Current Company Details
Karyopharm Therapeutics Inc.

Karyopharm Therapeutics Inc.

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Accomplished thought leader in Biological Data Analytics and Computational Biology
John Penn Work Experience Details
  • Karyopharm Therapeutics Inc.
    Director Clinical Data Analytics
    Karyopharm Therapeutics Inc. Aug 2024 - Present
    Newton, Ma, Us
  • Dnanexus
    Solutions Science Director
    Dnanexus Nov 2019 - Apr 2024
    Mountain View, Ca, Us
    •Conducted thought leadership sessions forecasting future trends in omics technologies, providing valuable insights into impact on research and medicine.•Led cross-disciplinary teams in collaborative projects, bridging gaps between scientific domains and stakeholders.•Created clear and productive frameworks for translating omics data into clinical applications, showcasing a vision for integrating genomic data into personalized medicine.•Applied problem-solving skills to address complex challenges in the use and analysis of omics data, demonstrating leadership in navigating scientific obstacles both as an individual contributor and as a team leader.•Developed guides on bioinformatics workflows, showcasing best practices on DNAnexus to drive research forward maximizing bioinformatics and data analysis skills.•Provided consultations to help design robust computational frameworks, demonstrating how statistical rigor and computational efficiency accelerate discovery in omics research.•Led seminars connecting cutting-edge research in Omics and bioinformatics with practical applications, guiding customers through planning and adapting to the future of these fields.•Shared insights on data management, emphasizing scalability and accessibility in handling large-scale omics data, including learnings from the production and management of the UKBiobank data.•Guided customers through regulatory compliance and ethical considerations in omics research, providing strategic insights for navigating complex landscapes.•Demonstrated effective tactical project management, guiding customers through project planning, execution, and completion of projects.•Drove the development of educational programs to keep customers at the forefront of bioinformatics and omics research, fostering a culture of continuous improvement.•Encouraged continuous innovation by exploring new applications of the DNAnexus platform in omics, leading to novel approaches to complex scientific questions.
  • Regeneron Pharmaceuticals, Inc.
    Senior Manager- Alliance Management, Strategic Partnerships, & Business Operations - Rgc
    Regeneron Pharmaceuticals, Inc. Mar 2019 - Nov 2019
    Tarrytown, New York, Us
    •Ensured compliance with collaboration terms by monitoring and enforcing RGC collaboration agreements with internal and external stakeholders.•Implemented processes to evaluate and address deficiencies in collaboration enforcement and accountability, enhancing operational efficiency and effectiveness.•Developed automated tracking systems to monitor key contract deliverables and identify areas for improvement in collaboration management.•Remedied existing breaches and systemic issues by utilizing process tracking and data analysis to drive actions.•Collaborated with internal stakeholders, legal teams, and leadership to negotiate and manage amendments and extensions to collaboration agreements, ensuring alignment with strategic goals.•Provided immediate assessment and resolution of issues related to collaboration deliverables and timelines, maintaining project momentum and quality standards.•Led "Special Projects" involving concept due diligence, program planning, and market analysis, including serving as the business lead for a white-label website development and the technical lead for Salesforce implementation and rollout.
  • Regeneron Pharmaceuticals, Inc.
    Senior Manager, Ngs Production
    Regeneron Pharmaceuticals, Inc. Jan 2019 - Nov 2019
    Tarrytown, New York, Us
    •Elevated support for multiple Regeneron departments in leveraging RGC-generated data, enhancing data utilization and driving informed decision-making across the organization.•Advanced as a prominent thought leader in the utilization of "omics" data company-wide, contributing strategic insights and fostering innovation in data-driven initiatives at Regeneron.
  • Regeneron Pharmaceuticals, Inc.
    Manager, Ngs Data Analysis
    Regeneron Pharmaceuticals, Inc. Jan 2016 - Dec 2018
    Tarrytown, New York, Us
    •Enhanced support for internal and external partners by providing thought leadership in the utilization of NGS data, driving innovation and strategic decision-making.•Expanded and optimized analysis pipelines to accommodate the rapid growth in sample volume, exceeding expected rates by 4x, including support for the UK Biobank initiative.
  • Regeneron Pharmaceuticals, Inc.
    Associate Manager, Ngs Data Analysis
    Regeneron Pharmaceuticals, Inc. Jan 2014 - Dec 2015
    Tarrytown, New York, Us
    •Led the design, development, and deployment of automated production data analysis pipelines to enhance efficiency and accuracy in data processing, from the inception of the company.•Provided comprehensive support to users in statistical genetics and translational genetics by leveraging data science expertise to address complex analytical challenges.
  • Transgenomic
    Bioinformatics Scientist
    Transgenomic Jun 2012 - Jan 2014
    Omana (Ne), Nebraska, Us
    •Provided comprehensive support for compute and informatics operations in a small clinical sequencing company, ensuring seamless functioning of computational processes.•Led the transition of multiple Sanger-sequencing based clinical tests to next-generation sequencing platforms, improving efficiency and data quality.•Served as the technical lead for the rollout of Laboratory Information Management System (LIMS), optimizing sample delivery, lab processes, and clinical report generation, resulting in a 30% decrease in test turnaround time.•Successfully ported NGS test for Nuclear Mitome disorders to a cloud-based compute system, enhancing scalability and accessibility of genetic testing services.
  • Seattle Children'S
    Research Scientist Iii
    Seattle Children'S Jul 2011 - Jun 2012
    Seattle, Wa, Us
    •Pioneered the design and implementation of the first Next-Generation Sequencing (NGS) test for Nuclear Mitome disorders, advancing genetic testing capabilities.•Provided essential support to the lab by conducting computational analysis of data, optimizing sequencing metrics, and developing efficient pipelines for data processing.•Developed an automated informatics package for a commercial partner (Transgenomic), streamlining data analysis processes and enhancing operational efficiency

John Penn Skills

Bioinformatics Molecular Biology Genomics Biotechnology Life Sciences Sequencing Lifesciences Genetics Computational Biology Data Analysis Cancer Pcr Dna Sequencing Science Clinical Research Informatics Cell Culture Proteomics Dna Biostatistics R Systems Biology Infectious Diseases Data Mining Lims Sequence Analysis Personalized Medicine Machine Learning Genotyping Human Genetics Translational Research High Performance Computing Genome Analysis Ngs Statistics Pharmacogenomics Biology Functional Genomics Automation Cloud Computing

John Penn Education Details

  • Uc Santa Barbara
    Uc Santa Barbara
    Physical Geography / Biochemistry
  • Arizona State University
    Arizona State University
    Computational Bioscience

Frequently Asked Questions about John Penn

What company does John Penn work for?

John Penn works for Karyopharm Therapeutics Inc.

What is John Penn's role at the current company?

John Penn's current role is Accomplished thought leader in Biological Data Analytics and Computational Biology.

What is John Penn's email address?

John Penn's email address is jo****@****ron.com

What schools did John Penn attend?

John Penn attended Uc Santa Barbara, Arizona State University.

What skills is John Penn known for?

John Penn has skills like Bioinformatics, Molecular Biology, Genomics, Biotechnology, Life Sciences, Sequencing, Lifesciences, Genetics, Computational Biology, Data Analysis, Cancer, Pcr.

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