Jonathan Holmes Email & Phone Number

Greater Philadelphia Area

Developing and evaluating RAG systems such as Sherpath AI and ClinicalKey AI.Developed two chunking algorithms for XML documents, one that parses to plaintext and one that preserves XML structure. Both respect section boundaries where possible. These algorithms are used in Sherpath AI.Performed relationship extraction and sentiment analysis based on data from the medical literature and using both UMLS and EMMeT, Elsevier's proprietary medical ontology.Wrote the core code for the DxTER symptom checker.Used EfficientNet to do unsupervised image classification.

Greater Philadelphia Area

Troy, Ny

I studied linear elastic wave propagation under Prof. Joyce McLaughlin, a renowned pioneer in the field of inverse problems who was a Ford Foundation Professor of Mathematics and Director of the Inverse Problems Center at RPI.My research was largely self-directed—I solved complex, unstructured problems efficiently with little need for supervision, while providing clear and concise updates on my progress and results. I broke down, organized, and logged my tasks using Org-mode and spreadsheets in order to create effective schedules and meet deadlines.Before working with Prof. McLaughlin, I modeled the effect of internal waves on ocean acoustic wave propagation in MATLAB.

Troy, Ny

I was the TA for various single and multi-variable Calculus courses and for MATH 4700, Foundations of Applied Mathematics.

Arlington, Va

Using MATLAB, I modeled the propagation of acoustic signals from underwater explosions in the far-field using adiabatic modes.

Doctor Of Philosophy (Ph.D.), Mathematics, 3.82 Gpa

I took courses in numerical linear algebra, optimization and regularization, probability, inverse problems, mathematical modeling, partial.

M.A. And B.A. Hons, Mathematics, Upper Second Class

I acquired a deep understanding of the underpinnings of applied mathematics. This helps me pick appropriate problem-solving techniques.