Head Of Platform Product And Scientific Development
Accelerating R&D to untangle the complexity of life
Mar 2022 - Oct 2024
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Jonathan Karr Email & Phone Number
Accelerating R&D to untangle the complexity of life
2 work emails found
@mssm.edu
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✓ Verified August 2026
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Profile completeness 86%
Role
Accelerating R&D to untangle the complexity of life
Location
San Carlos, California, United States
Who is Jonathan Karr? Overview
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Jonathan Karr is listed as Accelerating R&D to untangle the complexity of life based in San Carlos, California, United States. AeroLeads shows a work email signal at mssm.edu and a matched LinkedIn profile for Jonathan Karr.
Jonathan Karr previously worked as Head of Platform Product and Scientific Development at Deep Origin and Assistant Professor at Icahn School Of Medicine At Mount Sinai. Jonathan Karr holds Phd, Biophysics from Stanford University.
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Profile bio
About Jonathan Karr
Technologist focused on developing tools to both simplify today's science and make tomorrow's science possible, from the wet lab to data visualization, bioinformatics, and simulation. In particular, my focus is developing methods, infrastructure, and community to enable holistic integrative computational "whole-cell" models of individual cells. At the core, this involves abstracting the building blocks of scientific investigation and knowledge to make it easier to execute these building blocks, combine them into a holistic approach to investigation and holistic understanding of biology, and deliver them through simple, yet powerful and flexibility user interfaces.I have over 15 years of experience as a world leader in whole-cell modeling. Through computational biology, I have deep experience in molecular and cell biology; data, knowledge, model, and software engineering; and user interfaces and data visualization.
Listed skills include Bioinformatics, Computational Biology, Molecular Biology, Systems Biology, and 11 others.
5 roles · 13 years
Jonathan Karr work experience
A career timeline built from the work history available for this profile.
Assistant Professor
Developing computational models of health & disease.
2014 - Mar 2022
Research Assistant To Prof. Markus Covert
Developed the first comprehensive "whole-cell" computational model. Developed a novel hybrid mathematical framework. Assembled a new molecular biology database. Designed and integrated sub-models of 28 cellular processes. Developed novel algorithms for parameter estimation. Constructed new tools for exploratory data analysis. Conducted a forward genetic screen to validate the model. Investigated the molecular determinants of M. genitalium growth and division to discover new biology. Published work in Cell and Bioinformatics. Mentored several undergraduate and graduate students.
Jun 2007 - 2014
Research Assistant To Prof. Jim Dicarlo
Developed novel assistive surgical technology to support visual system research in non-human primates. Developed a device that detects the 3-D localization of implanted electrodes and fiducial markers in rhesus monkeys using two pairs of x-ray sources and detectors. Integrated x-ray hardware into an existing surgical systems. Implemented hardware control and image acquisition and processing software.
Feb 2006 - May 2006
Research Assistant To Prof. Michale Fee
Developed novel assistive surgical technology to support systems neuroscience research of learning and memory in song birds. Designed and constructed technology that guides the localization of electrode implantation in songbirds. Integrated technology into existing experimental protocols.
Jun 2004 - Aug 2005
4 education records
Jonathan Karr education
Phd, Biophysics
Stanford University
Ms, Medicine
Stanford University
Sb, Physics
Massachusetts Institute Of Technology
Sb, Brain & Cognitive Sciences
Massachusetts Institute Of Technology
FAQ
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What is Jonathan Karr's role at their current company?
Jonathan Karr is listed as Accelerating R&D to untangle the complexity of life.
What is Jonathan Karr's email address?
AeroLeads has found 2 work email signals at @mssm.edu for Jonathan Karr.
Where is Jonathan Karr based?
Jonathan Karr is based in San Carlos, California, United States.
What companies has Jonathan Karr worked for?
Jonathan Karr has worked for Deep Origin, Icahn School Of Medicine At Mount Sinai, Stanford University, and Mit.
How can I contact Jonathan Karr?
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What schools did Jonathan Karr attend?
Jonathan Karr holds Phd, Biophysics from Stanford University.
What skills is Jonathan Karr known for?
Jonathan Karr is listed with skills including Bioinformatics, Computational Biology, Molecular Biology, Systems Biology, Software Engineering, Cell Biology, Cell, and Science.
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