Krzysztof Jurdziński Email & Phone Number

Sztokholm, Region Sztokholm, Szwecja

Region Sztokholm, Szwecja

Project in the Environmental Genetics group supervised by Anders Andersson, entitled: "Molecular evolution in bacteria transitioning to a new environment". Comparative analyses of metagenome-assembled genomes from freshwater, brackish and marine environments, using a set of bioinformatic tools and statistical analysis in R.

Project in the Environmental Genetics group supervised by Anders Andersson. Identified convergent patterns of gene gain/loss in metagenome-assembled genomes of bacteria transitioning between marine, brackish and freshwater environments. Statistical analyses in R based on non-parametric statistics and machine learning (random forest). Further analysed and interpreted the results in a functional context.

Project in the Environmental Genetics group at KTH (lead by Anders Andersson), supervised by Meike Latz. Analysis of Baltic Sea 18S metabarcoding dataset in context of spatiotemporal changes, physicochemical metadata and microscopy-based taxonomy counts. The analysis started with sequencing output provided by a core facility and has been mainly performed in R. It involved general data exploration/analysis tools (ex. tidyverse), as well as more field-specific ones (ex. DADA2 and vegan packages).

Affiliated to Sandberg Lab. Was involved in a high-throughput compound screening project deploying NASCseq and Smart-seq3xpress development. The main focus laid on automation, setting up in-house protocols for Opentrons' OT-2 and MGISP-960 pipetting robots. In both cases Python-based API provided by producer was used to program the actions performed by the robot.

Sztokholm, Szwecja

Project under supervision of Veronika Krmeska and co-supervision of Antonio Rothfuchs. The title of the project was "Effect of Vaccinia virus and mycobacteria on dendritic cell migration to draining lymph node". Used methods included RNA isolation from mice tissue, qPCR, FACS, immunostaining and confocal fluorescent microscopy. Presented the results orally, in form of a poster and a report. The program ended with symposium at the University of Cambridge.

Wrocław, Woj. Dolnośląskie, Polska

A mini-project under supervision of Marcin Wolański. Obtained strains of Streptomyces bacteria that enable monitoring of chosen gene promoters activity using luciferase reporter genes. Verified functionality of bacterial constructs. Used methods included PCR, electrophoresis, SDS-Page, Western Blot, restriction digest and EMSA.

Master Of Science - Ms, Molecular Techniques In Life Science

Master Of Science - Ms, Molecular Techniques In Life Science

Molecular Techniques In Life Science

Undergraduate, Biochemistry