Srdjan Kasapovic Email & Phone Number

Serbia

● Leading bioinformatics and software development projects.● Planning and organizing software/system architecture.● Developing nextflow orchestrated bioinformatics pipelines.● Developing and deploying cloud-based (AWS) bioinformatics platforms optimized for genomics and high level scaling, enabling efficient data analysis and visualization, storage, and interpretation.

● Managed multiple projects on the technical side, as lead engineer.● Involved in the recruitment and training of new staff.● Developed multiple AWS bioinformatics solutions that incorporated Dragen instances.● Developed a comprehensive copy number variation and annotation pipeline.● Planned and developed antigen discovery pipeline. Completely automated steps that began with afile touch from the Illumina sequencer and ended with a medical PDF report.

● Consulting for a software development company on bioinformatics cloud implementations.● Writing project documentation and planning.● Consulting on bioinformatics tool choice for a given project.

● Worked on cloud computing, creating scripts, programs and tools for biomedical data analysis usingDocker, python and R which are later deployed on the SBG platform. This also includes writingtechnical documentation for the released tools (in English).● Developed, benchmarked and optimized differential expression tools based on edgeR package.Collaborated with the bioinformatics team to create a new report standard for differential expressiontools on the platform.● Maintained and updated the main RNA-seq quantification tool on the platform, based on HTSeq.

Banja Luka

Worked on delivery and installation of NCRs Hosted products, sales and payments, software and hardware maintenance, creating, updating and automatizing SQL db reports. Working with on-site technicians, customers and engineers to deploy the Loyalty solutions for small business and large corporate chains alike.