Lorena Pantano

Lorena Pantano Email and Phone Number

Founder and Chair @ Boston Women in Bioinformatics
Cambridge, MA, US
Lorena Pantano's Location
Cambridge, Massachusetts, United States, United States
About Lorena Pantano

14 years of experience working with high-dimensional genomic data, implementing secure, scalable and reproducible cloud infrastructure and developing innovative AI methods to interpret NGS/Imaging data to target discovery, target validation, gene editing and system biology programs in Hospitals, Biotechs and Big Pharma. **Biotech Consultant/Advisor** (2020 to present): Advise on technology, computational biology and bioinformatics strategy for emerging BioTechs building data lakes and novel methods to accelerate the process of target discovery, gene editing and drug development pipelines**Founder and Organizer of [Women in Bioinformatics](https://www.meetup.com/boston-area-womens-bioinformatics/) in the Boston Area** (2016 to present): Empowering women in computational biology and bioinformatics in academia and biotech by creating a safe and supportive space for career development alongside like-minded peers.**Board Member at [AWIS MASS](https://massawis.org/board-members-2024-2025/) - Mentoring committee** (2024 to present): Fostering the mentoring effort in the organization.**[Ambassador](https://www.nextflow.io/ambassadors.html) Nextflow** (2024 to present): Empowering the use of [Nextflow](https://www.nextflow.io/index.html) and [nf-core](https://nf-co.re) technology in the genomic space.**Co-chair of [Genomics Bioinformatics](https://abrf.org/research-groups/genomics/genomics-bioinformatics/) ABRF** (2024 to present): Continuing the effort to investigate genomics technologies applied in cores.At NextRNA Therapeutics, I lead a team of FTEs and CROs to use NGS technologies for target identification and drug discovery programs focused on RNA structure and RNA-Protein interaction. I was responsible for the cloud infrastructure to analyze and store patient data securely under NIH legal compliance. I built the internal interactive visualization platform to speed up the knowledge sharing across groups.At eGenesis, I internalized NGS technology (10X, nanopore and Illumina) and built bioinformatics platform to validate our genome editing xenotransplantation programs and understand the immunological response of pig organs in non-human primates.At Harvard School of Public Health, I led the data science effort in a multi-million dollar collaboration with Boehringer Ingelheim and multiple groups at Harvard Medical School and Massachusetts General Hospital. Besides that, I collaborated with more than 30 groups in projects dedicated to platform development, neurodegeneration and oncology biology.

Lorena Pantano's Current Company Details
Boston Women in Bioinformatics

Boston Women In Bioinformatics

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Founder and Chair
Cambridge, MA, US
Lorena Pantano Work Experience Details
  • Boston Women In Bioinformatics
    Founder And Chair
    Boston Women In Bioinformatics
    Cambridge, Ma, Us
  • Mass Awis
    Board Of Director - Mentoring Committee
    Mass Awis Jun 2024 - Present
    Boston, Ma, Us
    Co-Chair Mentoring CommitteeCollaborate with other committees to achieve year goals
  • Harvard T.H. Chan School Of Public Health
    Director Of Bioinformatics Platform
    Harvard T.H. Chan School Of Public Health Apr 2024 - Present
    Boston, Massachusetts, Us
    - 𝗣𝗿𝗼𝗱𝘂𝗰𝘁 𝗟𝗲𝗮𝗱𝗲𝗿𝘀𝗵𝗶𝗽 𝗮𝗻𝗱 𝗠𝗮𝗻𝗮𝗴𝗲𝗺𝗲𝗻𝘁: - Lead and manage bioinformatics products, ensuring reliability, efficiency, and scalability for genomic, transcriptomic, and other omics data analysis. - 𝗗𝗲𝘃𝗲𝗹𝗼𝗽𝗺𝗲𝗻𝘁 𝗼𝗳 𝗜𝗻𝘁𝗲𝗿𝗮𝗰𝘁𝗶𝘃𝗲 𝗩𝗶𝘀𝘂𝗮𝗹𝗶𝘇𝗮𝘁𝗶𝗼𝗻 𝗣𝗹𝗮𝘁𝗳𝗼𝗿𝗺: - Spearheaded the creation of a platform that enhances accessibility to complex biological data across diverse research programs. - 𝗧𝗲𝗮𝗺 𝗟𝗲𝗮𝗱𝗲𝗿𝘀𝗵𝗶𝗽 𝗮𝗻𝗱 𝗠𝗲𝗻𝘁𝗼𝗿𝘀𝗵𝗶𝗽: - Guide and mentor a team of bioinformaticians, promoting an environment of collaboration and innovation. - 𝗖𝗼𝗻𝘀𝘂𝗹𝘁𝗮𝘁𝗶𝗼𝗻 𝗮𝗻𝗱 𝗖𝗼𝗹𝗹𝗮𝗯𝗼𝗿𝗮𝘁𝗶𝗼𝗻: - Consult with researchers and external collaborators to identify their bioinformatics needs and facilitated interdisciplinary project collaboration. - 𝗤𝘂𝗮𝗹𝗶𝘁𝘆 𝗔𝘀𝘀𝘂𝗿𝗮𝗻𝗰𝗲 𝗮𝗻𝗱 𝗗𝗼𝗰𝘂𝗺𝗲𝗻𝘁𝗮𝘁𝗶𝗼𝗻: - Oversee quality assurance processes, ensuring analysis accuracy, and maintained comprehensive documentation for all pipelines and workflows.
  • Freelance
    Scientific Executive Advisor
    Freelance Sep 2020 - Present
    Advise on technology, computational biology and bioinformatics strategy for emerging BioTechs building data lakes and novel AI methods to accelerate the process of target discovery, gene editing and drug development pipelines
  • Nextrna Therapeutics
    Head Of Computational Biology
    Nextrna Therapeutics May 2021 - Feb 2024
    Boston, Massachusetts, Us
    𝗘𝘅𝗲𝗰𝘂𝘁𝗶𝘃𝗲 𝗟𝗲𝗮𝗱𝗲𝗿𝘀𝗵𝗶𝗽 𝗮𝗻𝗱 𝗖𝗼𝗺𝗽𝘂𝘁𝗮𝘁𝗶𝗼𝗻𝗮𝗹 𝗕𝗶𝗼𝗹𝗼𝗴𝘆 𝗟𝗲𝗮𝗱𝗲𝗿𝘀𝗵𝗶𝗽- 𝗘𝘅𝗲𝗰𝘂𝘁𝗶𝘃𝗲 𝗟𝗲𝗮𝗱𝗲𝗿𝘀𝗵𝗶𝗽 𝗧𝗲𝗮𝗺 𝗠𝗲𝗺𝗯𝗲𝗿: Contributed to shaping company culture and strategic direction for genomics data and sequencing assays across multiple departments.- 𝗖𝗼𝗺𝗽𝘂𝘁𝗮𝘁𝗶𝗼𝗻𝗮𝗹 𝗕𝗶𝗼𝗹𝗼𝗴𝘆 𝗧𝗲𝗮𝗺 𝗟𝗲𝗮𝗱𝗲𝗿𝘀𝗵𝗶𝗽: - Acted as the key interface among Biology, Technology, and Drug Discovery teams. - Directed the in-silico target discovery and validation efforts, successfully integrating NGS technology with innovative visualization methods.- 𝗦𝗲𝗾𝘂𝗲𝗻𝗰𝗶𝗻𝗴 𝗧𝗲𝗰𝗵𝗻𝗼𝗹𝗼𝗴𝘆 𝗠𝗮𝗻𝗮𝗴𝗲𝗺𝗲𝗻𝘁: - Oversaw the application of Illumina and Nanopore sequencing technologies, managing both internal FTEs and external CRO partnerships.- 𝗔𝗜 𝗘𝗻𝗴𝗶𝗻𝗲 𝗗𝗲𝘃𝗲𝗹𝗼𝗽𝗺𝗲𝗻𝘁: - Developed the RNA structure and RNA-Protein interaction AI engine utilizing SHAPE-Seq and eCLIP-Seq derived data.- 𝗖𝗹𝗼𝘂𝗱 𝗜𝗻𝗳𝗿𝗮𝘀𝘁𝗿𝘂𝗰𝘁𝘂𝗿𝗲 𝗠𝗮𝗻𝗮𝗴𝗲𝗺𝗲𝗻𝘁: - Managed the cloud computational infrastructure to ensure reproducibility and scalability of computational operations.
  • Axcella
    Principal Scientist - Computational Biology
    Axcella Sep 2020 - Apr 2021
    Cambridge, Ma, Us
  • Egenesis, Inc.
    Senior Computational Biologist
    Egenesis, Inc. Sep 2019 - Sep 2020
    Cambridge, Ma, Us
  • Harvard T.H. Chan School Of Public Health
    Computational Biology Scientist
    Harvard T.H. Chan School Of Public Health May 2017 - Apr 2019
    Boston, Massachusetts, Us
    Data analysts of next-generation sequencing: small RNA, RNAseq, Chip-seq ... Development of pipelines to allow reproducibility of analysis and improvement of visualisation concepts of big data.
  • Harvard T.H. Chan School Of Public Health
    Computational Biology Associate
    Harvard T.H. Chan School Of Public Health May 2014 - Jun 2017
    Boston, Massachusetts, Us
  • Boehringer Ingelheim
    Computational Biologist - Fellowship
    Boehringer Ingelheim Jan 2016 - Jan 2019
    Ingelheim Am Rhein, Rhineland-Palatinate, De
    Lead the bioinformatic analysis (Harvard Side) in a international collaboration for the study of fibrosis across organs
  • Ibb
    Post-Doctoral Fellow
    Ibb Jun 2013 - Jun 2014
    Working with NGS to correlate gene expression and inversions in general population
  • Ascidea, S.L., Computational Biology Solutions
    Bioinformatics Leader
    Ascidea, S.L., Computational Biology Solutions Jan 2012 - Oct 2013
    Sant Cugat Del Vallès, Barcelona, Es
    Development of the best methods for the analysis of biomedical big data, and development of predictive models for risk predictions and pharmacogenetic treatments decision.
  • Ascidea, S.L., Computational Biology Solutions
    Co-Founder
    Ascidea, S.L., Computational Biology Solutions Sep 2011 - Jan 2012
    Sant Cugat Del Vallès, Barcelona, Es
    Co-founder of the company. The main objective of the company is to provide the best methods for the analysis of big data to institutions and another companies. Also, aScidea is starting to build predictive models for risk predictions and pharmacogenetics.
  • Imppc
    Post-Doctoral Fellow
    Imppc Jun 2011 - Mar 2013
    Badalona, Barcelona, Es
    Evolution of chromatin architecture and small RNA analysis
  • Rsgspain
    Co-Chair Of The Ii North Africa, Portugal And Spain Bioinformatic Student Symposium
    Rsgspain Jan 2012 - Jan 2012
    Organizing symposium
  • Center For Genomic Regulation
    Phd
    Center For Genomic Regulation Mar 2006 - Jun 2011
    Barcelona, Barcelona, Es
    Novel computational methods of small RNA sequencing data, PhD
  • Scs2011 - Vienna
    Chair
    Scs2011 - Vienna Sep 2010 - Jan 2011
    Organize the international symposium
  • Rsg Spain
    Founder
    Rsg Spain Jan 2010 - Jan 2011
    President at the beginning and secretary currently

Lorena Pantano Skills

Bioinformatics Genomics Computational Biology Sequencing R Molecular Biology Genetics Data Analysis Systems Biology Programming Sequence Analysis Linux Data Mining Python Bioconductor Transcriptomics Perl English Rnaseq Machine Learning Dna Sequencing Php Mysql Java Chip Seq Comparative Genomics Bioperl Microarray Epigenetics Databases Organizing Social Networking Small Rna Seq Data Visualization Microarray Analysis Functional Genomics Structural Bioinformatics Bedtools

Lorena Pantano Education Details

  • University Of Pompeu Fabra
    University Of Pompeu Fabra
    Bioinformatics
  • Universitat Pompeu Fabra
    Universitat Pompeu Fabra
    Bioinformatics In Health Science
  • Universidad De Granada
    Universidad De Granada
    Biochemistry

Frequently Asked Questions about Lorena Pantano

What company does Lorena Pantano work for?

Lorena Pantano works for Boston Women In Bioinformatics

What is Lorena Pantano's role at the current company?

Lorena Pantano's current role is Founder and Chair.

What is Lorena Pantano's email address?

Lorena Pantano's email address is lp****@****ard.edu

What schools did Lorena Pantano attend?

Lorena Pantano attended University Of Pompeu Fabra, Universitat Pompeu Fabra, Universidad De Granada.

What are some of Lorena Pantano's interests?

Lorena Pantano has interest in Sequencing, Wikipedia, Science And Technology, Robots, Bioinformatisc.

What skills is Lorena Pantano known for?

Lorena Pantano has skills like Bioinformatics, Genomics, Computational Biology, Sequencing, R, Molecular Biology, Genetics, Data Analysis, Systems Biology, Programming, Sequence Analysis, Linux.

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