Mark Monroe

Mark Monroe Email and Phone Number

Lead Data Engineer, Next-Generation DNA Sequencing, ARUP Laboratories @ ARUP Laboratories
Mark Monroe's Location
Salt Lake City, Utah, United States, United States
Mark Monroe's Contact Details

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About Mark Monroe

Responsible for the design and implementation of a Next Generation Sequencing data processing pipeline. Using a combination of microservices, AWS SQS, AWS Kinesis, AWS EKS and MongoDB, the Cloud based system routinely processes terabytes of data. Technical lead over a five-person DevOps team and eight-person software engineering team in a healthcare setting. Leadership Responsibilities- Manage a team of five DevOps engineers in charge of deploying and supporting the departments AWS environments- Manage a team of eight developers with skills in Python, JavaScript, and Software Quality Assurance- Evaluate new software and Cloud technologies- Participate in departmental management meetingsTechnical Responsibilities- Architectural design of Next Generation Sequencing (NGS) data processing pipeline and web portal- MongoDB cluster management and query optimization- Oversee the design and management of the department’s CI/CD system which utilizes TeamCity, Octopus, and AWS ECR- Lead Python code reviews- Develop software in Python- Ensure software and infrastructure meet College of American Pathologists (CAP) guidelines for NGS clinical testingCurrent Projects- Lead the implementation of Istio Service Mesh to improve network security in AWS EKS- Implement streaming between business domains to reduce microservice coupling- Expand the use of event-driven architecture through a combination of MongoDB change streams and AWS Kinesis

Mark Monroe's Current Company Details
ARUP Laboratories

Arup Laboratories

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Lead Data Engineer, Next-Generation DNA Sequencing, ARUP Laboratories
Mark Monroe Work Experience Details
  • Arup Laboratories
    Lead Data Engineer
    Arup Laboratories Feb 2015 - Present
    Salt Lake City, Utah, Us
    Leadership Responsibilities• Manage a team of five DevOps engineers in charge of deploying and supporting the departments AWS environments• Manage a team of eight developers with skills in Python, JavaScript, and Software Quality Assurance• Evaluate new software and Cloud technologies• Participate in departmental management meetingsTechnical Responsibilities• Architectural design of Next Generation Sequencing (NGS) data processing pipeline and web portal• MongoDB cluster management and query optimization• Oversee the design and management of the department’s CI/CD system which utilizes TeamCity, Octopus, and AWS ECR• Lead Python code reviews• Develop software in Python• Ensure software and infrastructure meet College of American Pathologists (CAP) guidelines for NGS clinical testingCurrent Projects• Lead the implementation of Istio Service Mesh to improve network security in AWS EKS• Implement streaming between business domains to reduce microservice coupling• Expand the use of event-driven architecture through a combination of MongoDB change streams and AWS Kinesis
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  • Desert Research Institute
    Data Engineer
    Desert Research Institute Jun 2014 - Feb 2015
    Reno, Nevada, Us
    • Responsible for the development of a data analysis system using Hadoop, Hive, Phoenix on Hbase, and Spark.• Architect and manage the Hortonworks Data Platform deployment at the Applied Innovation Center for Advanced Analytics at Desert Research Institute (DRI)• Manage Business Intelligence and Data Analytic vendor relationships. • Select and manage Big Data/Business Intelligence consultants.• Be a technical conduit between Research Faculty and private sector companies to facilitate use of DRI technology in the private sector
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  • Beijer Electronics, Inc.
    Application Engineer
    Beijer Electronics, Inc. Mar 2012 - Oct 2013
    Malmö, Se
    • Managed the specification and customization of Salesforce Service Cloud, a case management system.• Implemented Microsoft SharePoint 2013, which is used as the engineering group’s collaboration platform. • Provided product management with technical recommendations on market positioning of automation products such as CodeSys SoftPLCs.• Worked closely with customers to ensure they successfully deployed our Human Machine Interfaces (HMI) on industrial automation equipment. That included developing and providing customers with Microsoft C# coding examples.• Provided on site training on how to use C# to program iX Developer, Beijer’s flagship user interface development environment.
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  • University Of Zurich
    Scientific Computing Researcher
    University Of Zurich Jan 2009 - Nov 2010
    Zurich, Ch
    • Designed and coded a framework (GC3Pie) in Python that controls the flow and execution of batch processes. By allowing researchers to execute computational jobs on multiple clusters at the same time, more CPU’s can be harnessed to complete the calculation.• Worked with numerous numerical optimization and function minimization algorithms to ensure that the framework could successfully control the job flow.• The project ran on Linux computers and used MongoDB for object storage.
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  • University Of Zurich
    Research Assistant
    University Of Zurich Jan 2008 - Dec 2008
    Zurich, Ch
    • Parameterized a plant growth model using dipterocarp growth data.• Used Markov chain Monte Carlo Bayesian methods to parameterize a dipterocarp growth model using real world growth data.• Explored using non-linear statistical models as a way to model the dipterocarp growth data.• Matlab and the R statistical package were used extensively throughout the work.
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  • Ats Automation
    Software Engineer
    Ats Automation Jul 2001 - Dec 2005
    Cambridge, On, Ca
    • Develop/design/modify software that controls precision industrial automation machines• Developed tools in object oriented C++ using ATS proprietary machine control and vision libraries• Worked closely with customers during machine installation and buy off • Lead software engineer for multimillion dollar optical lithography automation machine project
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Mark Monroe Skills

Graphql Python Mongodb Big Data Databases Grid Computing Hadoop Data Analysis Project Management Algorithms

Mark Monroe Education Details

  • University Of Zurich
    University Of Zurich
    Environmental Science
  • Humboldt State University
    Humboldt State University
    General

Frequently Asked Questions about Mark Monroe

What company does Mark Monroe work for?

Mark Monroe works for Arup Laboratories

What is Mark Monroe's role at the current company?

Mark Monroe's current role is Lead Data Engineer, Next-Generation DNA Sequencing, ARUP Laboratories.

What is Mark Monroe's email address?

Mark Monroe's email address is mj****@****hoo.com

What is Mark Monroe's direct phone number?

Mark Monroe's direct phone number is +154128*****

What schools did Mark Monroe attend?

Mark Monroe attended University Of Zurich, Humboldt State University.

What skills is Mark Monroe known for?

Mark Monroe has skills like Graphql, Python, Mongodb, Big Data, Databases, Grid Computing, Hadoop, Data Analysis, Project Management, Algorithms.

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