Martin Vickers

Martin Vickers Email and Phone Number

Senior Scientist at the John Innes Centre @ John Innes Centre
norwich, norfolk, united kingdom
Martin Vickers's Location
Greater Norwich Area, United Kingdom, United Kingdom
Martin Vickers's Contact Details

Martin Vickers personal email

n/a
About Martin Vickers

I am an IT professional, data scientist and system administrator focusing on research computing for over fifteen years. With a PhD in Planetary Physics and a MSc in Remote Sensing underpinned by a Computer Science BSc, I have applied computational resources and methods to a variety of research disciplines, most recently in the field of bioinformatics at the John Innes Centre. I've procured, built and managed High Performance Computing (HPC) clusters, storage and virtualisation infrastructure and acted as a consultant for several research institutions in their infrastructure needs. I've worked on a variety of research projects, authored several high profile papers which have been cited widely and write open source software for the bioinformatics community.In my free time I enjoy hiking, SCUBA diving, general computer geekery and building things.

Martin Vickers's Current Company Details
John Innes Centre

John Innes Centre

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Senior Scientist at the John Innes Centre
norwich, norfolk, united kingdom
Website:
jic.ac.uk
Employees:
389
Martin Vickers Work Experience Details
  • John Innes Centre
    Senior Scientist
    John Innes Centre Jan 2022 - Present
    Norwich
    I work on a variety of genomics projects, most recently working with Pisum sativum, Marchantia, Wheat and Brassica. I've also been involved in over a million pounds of infrastructure procurement (GPU HPC compute and distributed storage), sit on the Scientific Computing Committee and Research Computing Operations Group as well as leading the development of Remote Sensing capability for plant phenotyping using drones.
  • John Innes Centre
    Post Doctoral Scientist (Bioinformatics)
    John Innes Centre May 2016 - Dec 2021
    Norwich, United Kingdom
    Working in the Feng lab at the JIC to investigate the epigenetic regulation of genome-wide changes in chromatin as the plant germline develops. My research examines the epigenetic effect of transposable elements, highly repetitive regions of DNA which until quite recently have largely been considered to be non-functional or junk. I support the bioinfomatics needs of the lab members, developing new tools and performing analysis on a variety of data sets. I work with several genomic and high-throughput sequencing datasets such as RNA-seq, Bisulfite-seq, ChIP-seq and pacbio SMRT-seq.
  • Aberystwyth University - Institute Of Biological, Environmental And Rural Sciences
    Data Manager/Hpc Systems Administrator
    Aberystwyth University - Institute Of Biological, Environmental And Rural Sciences May 2013 - May 2016
    Aberystwyth
    I co-ordinate the provision of research computing resources for the Institute of Biological, Environmental and Rural Sciences (IBERS) at Aberystwyth University. I built and currently manage the virtualisation environment to provide local cloud computing services for IBERS staff and collaborators. I am the Systems Administrator for the High Performance Computing (HPC) cluster as well as essential services such as back-end databases, front facing web-services, internal proprietary applications and also local instances of commonly used bioinformatics services.
  • Aberystwyth University - Institute Of Mathematics And Physics
    Computer Support Officer
    Aberystwyth University - Institute Of Mathematics And Physics May 2012 - May 2013
    Aberystywyth
    In this role I support all aspects of computing within the institute. This includes dealing with day-to-day issues for individual users, such as desktop computers, printing and student lab machines. I am responsible for ensuring shared resources such as file stores, print and licence servers and domain controllers are up-to-date, secure and accessible. I also assist in specialist work to develop imagery for 3D screens, GPU coding in CUDA and assisting with High Performance Computing projects.
  • Aberystwyth University - Institute Of Biological, Environmental And Rural Sciences
    Systems Administrator
    Aberystwyth University - Institute Of Biological, Environmental And Rural Sciences Feb 2012 - May 2012
    Aberystwyth
    With the expansion of the Bioinformatics group at Aberystwyth University, a new High Performance Computing (HPC) cluster was purchased. My role for three months was to set-up the system, perform software installations, backups, define user policy, queue management and security. An important aspect was to train researchers how best to take advantage of the facilities, develop work flows and encourage collaborative projects between departments. Upon completion of the three month contract I have continued to maintain the IBERS HPC until the role is filled permanently.

Martin Vickers Skills

Science Computer Science Latex High Performance Computing Fortran Programming Research Remote Sensing Python Matlab Image Processing Numerical Analysis Scientific Writing Computer Vision Artificial Intelligence Java Idl Physics Image Analysis Mathematical Modeling Machine Learning Linux Unix Scuba Diving Ubuntu Bash Unix Shell Scripting Unix Administration Opengl Network Administration Earth Observation University Teaching Windows Astronomy Algorithms Experimentation Perl Git Bioinformatics Teaching C/c++ Stl Microsoft Windows Computer Graphics Xen Virtualization Enterprise Storage R Puppet Nagios Data Analysis

Martin Vickers Education Details

Frequently Asked Questions about Martin Vickers

What company does Martin Vickers work for?

Martin Vickers works for John Innes Centre

What is Martin Vickers's role at the current company?

Martin Vickers's current role is Senior Scientist at the John Innes Centre.

What is Martin Vickers's email address?

Martin Vickers's email address is ru****@****ail.com

What schools did Martin Vickers attend?

Martin Vickers attended University Of Wales, Aberystwyth, University College London, U. Of London, University Of Nottingham.

What are some of Martin Vickers's interests?

Martin Vickers has interest in Education, Mountaineering, Scuba Diving.

What skills is Martin Vickers known for?

Martin Vickers has skills like Science, Computer Science, Latex, High Performance Computing, Fortran, Programming, Research, Remote Sensing, Python, Matlab, Image Processing, Numerical Analysis.

Who are Martin Vickers's colleagues?

Martin Vickers's colleagues are Isabel Faci-Gómez, Brewin Nick, Tom Casey, Clare Lewis, Carlo De O Martins, Phd, Sarah Bailey, Gary Wortley.

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