Nathaniel Thomas Email & Phone Number

California, United States

Chicago, Illinois, United States

• Leveraging computational tools to efficiently design peptides to inhibit the HIV-1 Gag protein
• Applied Rosetta to identify hotspot residues through alanine scanning
• Used RFDiffusion to design a backbone based on hotspots and ProteinMPNN to generate sequences to fit the diffused backbone
• Computationally validated sequences through AlphaFold multimer before experimental validation
• One of twenty interns with stipends selected from over 500 applicants worldwide

Los Angeles, California, United States

• Developing models to make mathematically profitable sports bets in inefficient markets
• Accumulated over $5000 in profit within 2 months of operations

• Analyzed immune cell type removal for single-cell experiments across conditions and its effect on PARAFAC2 interpretation through targetted data reduction
• Applying PARAFAC2 to spatial transcriptomics data to gain insight into biological patterns with respect to geometric location

• Developed brand new machine learning curriculum for teens
• Taught classes in computer science targeted toward younger children, partnering with libraries
• 120+ hours of volunteering

Fremont, California, United States

• Used machine learning to better understand the differentiation of natural products and synthetic molecules
• Used machine learning to better understand algorithmic bias and developed mitigation techniques for facial recognitionmodels
• Designed novel Rivastigmine analogs for increased inhibition of AChE

Santa Cruz, California, United States

Used machine learning to better describe flows on large data center networks with Dr. Krishnaswamy as a part of the UCSC Engineering i-NRG Lab

Bachelor Of Science - Bs, Computer Science

Education record