Nidhin Thomas, Phd work email
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As a computational scientist, I specialize in the design and development of peptide-based therapeutics. My expertise is rooted in computational drug design, where I skillfully employ de novo design, docking, molecular dynamics simulations, and enhanced sampling techniques. During my doctoral research in Computational Biophysics, I delved deeply into the biophysical intricacies of lipid membranes and proteins, utilizing atomistic simulations and continuum modeling to uncover novel insights. Currently, I pursue M.S. in Computer Science with a focus on Artificial Intelligence, I am dedicated to integrating AI methodologies into my work, enhancing drug discovery processes and contributing to innovative therapeutic solutions.Skill set:Modeling and Simulation :GROMACS, NAMD, AMBER, OpenMM, GENESIS, RosettaCoding: Python, MATLAB, C++, BashDocking: AutoDock, HADDOCK, LIGHTDOCK, ClusProDeep Learning: Computer Vision, NLP, PyTorch, TensorflowWorkflow Managers: SLURM, Nextflow, Snakemake
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ScientistNovo NordiskLos Alamos, Nm, Us
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Postdoctoral Research AssociateLos Alamos National Laboratory Jul 2024 - PresentLos Alamos, Nm, Us -
ScientistNovo Nordisk Nov 2022 - Jul 2024Bagsværd, Dk
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Computational ScientistPeptilogics Oct 2021 - Nov 2022Pittsburgh, Pennsylvania, Us -
Doctoral StudentUniversity Of Houston Jan 2016 - Oct 2021Houston, Tx, UsQuantify structural and mechanical properties of biological soft matter such as lipid membranes and proteins through atomistic simulations and continuum modeling.Developed a continuum model of Kv channel proteins and simulated the role of membrane lipids in modulation of these channels.Quantified the in-plane flexoelectric coefficient of lipid membrane using molecular dynamics simulations.Investigated the effect of external lateral electric field in phase transition of lipid membranes.Performed free energy simulations to quantify the binding free energy of lipids with voltage sensor domain of ion channels.Conducted replica exchange molecular dynamics simulations to understand the folding of intrinsically disordered proteins in the presence of lipid bilayers. -
Engineer IiFmc Technologies Jul 2014 - Aug 2015Houston, Texas, UsI was involved in the design of next generation subsea HPHT valves & actuators. My responsibilities included perform design calculations, creation of specification documents and part reports for valve bonnet assemblies. I was responsible for handling the quality notifications (QNs) related to the manufacturing, testing and assembly of valves and actuators.Developed conceptual design of subsea actuator for Gate Valves.As a part of Valve Sure Source Project, I was responsible for the development of specification documents for design, manufacturing and qualification of FMC large bore gate valves based on customer requirements and industry standards. -
Engineer IFmc Technologies Jul 2013 - Jun 2014Houston, Texas, UsDeveloped knowledge in the manufacturing, assembly, testing and operation of manifold gate valves.Created design documents, guidelines, qualification and FAT procedures for subsea valves.Provided engineering dispositions for quality notifications related manufacturing, assembly, design and testing. Performed RCA to mitigate the non-conformance raised during manufacturing and testing.Worked on various projects like Chevron Wheatstone, Shell Prelude, Woodside GWF and Tullow Ten.
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Associate EngineerFmc Technologies Jul 2012 - Jun 2013Houston, Texas, UsCreated STD documents for surface wellhead components like casing hangers and casing spools.Worked on the standardisation of wellhead packoff, SBMS Seal family and elastomeric seals.
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Engineering InternEssar Apr 2011 - Jun 2011Mumbai, Maharashtra, InStudied various predictive maintenance techniques including Vibration Monitoring and Infrared Thermography.Performed experimental analysis of non-linear vibration behaviour of misaligned shafts using Fast Fourier Transform (FFT).
Nidhin Thomas, Phd Skills
Nidhin Thomas, Phd Education Details
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The University Of Texas At AustinComputer Science -
University Of HoustonMechanical Engineering
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Indian Institute Of Technology (Indian School Of Mines), DhanbadMechanical Engineering
Frequently Asked Questions about Nidhin Thomas, Phd
What company does Nidhin Thomas, Phd work for?
Nidhin Thomas, Phd works for Novo Nordisk
What is Nidhin Thomas, Phd's role at the current company?
Nidhin Thomas, Phd's current role is Scientist.
What is Nidhin Thomas, Phd's email address?
Nidhin Thomas, Phd's email address is ni****@****ies.com
What schools did Nidhin Thomas, Phd attend?
Nidhin Thomas, Phd attended The University Of Texas At Austin, University Of Houston, Indian Institute Of Technology (Indian School Of Mines), Dhanbad.
What are some of Nidhin Thomas, Phd's interests?
Nidhin Thomas, Phd has interest in Children, Badminton, Environment, Education, Chess, Reading, Poverty Alleviation, Science And Technology, Health.
What skills is Nidhin Thomas, Phd known for?
Nidhin Thomas, Phd has skills like Subsea Engineering, Mechanical Engineering, Mathcad, Product Design, Project Engineering, Manufacturing, Valves, Testing, Nx Unigraphics, Oil And Gas, Finite Element Analysis, Unigraphics.
Who are Nidhin Thomas, Phd's colleagues?
Nidhin Thomas, Phd's colleagues are Evie Koh, Anna Piekarska, Chiara Pregnolato, Sandra Nørkjær, Sujay Date, Fi With Gjessø, Surendra Kumar.
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