Patrick Lee

Patrick Lee Email and Phone Number

Vice President, CSO Partner Team @ Curie.Bio
California, United States
Patrick Lee's Location
San Francisco Bay Area, United States, United States
Patrick Lee's Contact Details
About Patrick Lee

Computational chemist with a track record of optimizing hits from various hit-finding efforts (FBDD, HTS, virtual screening, phenotypic screens), impacting lead optimization by structure based drug design, providing insightful data analysis leading to go/no-go decisions, and a champion of efficient drug discovery processes.Specialties: Fragment based ligand design (FBLD), pharmacophore models, free energy perturbation, conformational analysis, MD simulations, library enumeration, virtual screening, data mining, data visualizations, hit expansion.Software proficiency: KNIME, Spotfire, MOE, Cresset, ICM, Schrodinger Suite, PyMol, Gaussian, VIDA, CCDC tools, StarDrop, OpenEye.

Patrick Lee's Current Company Details
Curie.Bio

Curie.Bio

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Vice President, CSO Partner Team
California, United States
Website:
curie.bio
Employees:
114
Patrick Lee Work Experience Details
  • Curie.Bio
    Vice President, Cso Partner Team
    Curie.Bio
    California, United States
  • Curie.Bio
    Vice President, Drug Maker
    Curie.Bio Aug 2024 - Present
    Remote, Us
  • Curie.Bio
    Vice President, Cso Partner Team
    Curie.Bio Jun 2023 - Aug 2024
    Remote, Us
  • Maze Therapeutics
    Head Of Computational Chemistry (Principal Scientist/Senior Principal Scientist)
    Maze Therapeutics Apr 2019 - Jun 2023
    South San Francisco, California, Us
    Developed computational chemistry strategy at Maze to enable structure-based and ligand-based optimization to prioritize small molecule designs to move projects forward.Assessed new technologies and applied them in portfolio projects (AlphaFold multimer, ML-DEL, ultra-large docking, VR, FEP+/NES, virtual vendor libraries).Leveraged cryo-EM structures and MD to characterize binding pockets for accurate docking and activity prediction.Scientific member of IACUC - responsible for oversight of animal care and assessing protocol for all in vivo experiments at Maze.Co-inventor of MZE001 which completed Phase I as a potential treatment for Pompe Disease and MZE829, currently in Phase I clinical trials as a potential treatment for APOL1-mediated kidney disease.Led a team of full-time comp chemist, contractor, and intern.
  • Novartis
    Investigator/Senior Investigator
    Novartis Jan 2012 - Apr 2019
    Basel, Baselstadt, Ch
    Co-inventor of LTT462, an ERK inhibitor in phase I for treatment of patients with advanced solid tumors. Joint research steering committee member of NIBR-CPACT (Berkeley) collaboration. Responsible for assessing potential targets and generation of models of structures using proprietary chemical probes.Chemistry lead on an antibacterial target. Coordinated all hit-finding efforts and subsequent follow-up chemistry to optimize hits from fragment screen using available crystal structures. Efforts helped develop tool compounds which led to a no-go decision on the target.Member of a global fragment working group tasked to increase impact of FBDD at Novartis. Presented this topic at a global chemistry retreat and put together a proposal to local leadership team to enable teams to optimize fragment hits.Global champion of KNIME at Novartis - a low cost alternative to Pipeline Pilot. Coordinated with experts at various sites to prioritize porting of valuable workflows to KNIME with a full-time undergrad intern.Led design teams on various oncology and anti-infective targets to help prioritize design ideas leading to synthesis of these compounds and ultimately testing in various in vitro assays.
  • Eli Lilly And Company
    Senior Research Scientist
    Eli Lilly And Company Oct 2008 - Jan 2012
    Indianapolis, Indiana, Us
    Computational chemist on a kinase project which ultimately delivered a preclinical candidate.Led a deconstruction working group and championed the necessity of higher concentration biochemical screen as well as carrying out proper deconstruction of hits to identify minimal pharmacophores.Led a fragment-based effort for a kinase project consisting of team members across international sites, focused on ligand efficiency and lipophilic efficiency. Delivered highly soluble series exhibiting nM biochemical activity and cellular activity.Managed transfer of data and compounds upon acquisition of SGX by Eli Lilly.
  • Sgx Pharmaceuticals
    Scientist I/Scientist Ii
    Sgx Pharmaceuticals Feb 2006 - Oct 2008
    Us
    Intimately involved with design of compounds on cMet and other kinase projects by working with medicinal chemists and crystallographers leading to a compound that moved to Phase I clinical trials - SGX523 and its backup, SGX126. Provided structure based drug design inputs to various kinase projects - changed how design meetings were run by carrying out instant feedback on design ideas, allowing for prompt virtual iterations of optimizations. Created computational tools to analyze ligand-protein interactions in crystal structures.Managed a compound registration/management group comprised of a senior research associate and 3 part-time interns.
  • Yale University Chemistry Department
    Postdoctoral Fellow
    Yale University Chemistry Department Aug 2003 - Feb 2006
    New Haven, Ct, Us
    Advisor: W. L. JorgensenNIH Ruth L. Kirschstein FellowshipCo-President, Yale University Biotechnology Club
  • Ucla
    Research Assistant
    Ucla Sep 1998 - Jun 2003
    Los Angeles, Ca, Us
    Advisor: K. N. Houk
  • Georgetown University
    Undergraduate Research Assistant
    Georgetown University May 1996 - Aug 1996
    Washington, Dc, Us
    Imaging Science and Information Systems (ISIS) Center

Patrick Lee Skills

Drug Discovery Computational Chemistry Drug Design Biotechnology Medicinal Chemistry Chemistry Molecular Modeling Pharmaceutical Industry Adme Life Sciences High Throughput Screening Organic Chemistry Lead Change Biochemistry Monte Carlo Simulation Cheminformatics Knime Oncology Lead Optimization

Patrick Lee Education Details

  • Ucla
    Ucla
    Chemistry
  • Pomona College
    Pomona College
    Chemistry

Frequently Asked Questions about Patrick Lee

What company does Patrick Lee work for?

Patrick Lee works for Curie.bio

What is Patrick Lee's role at the current company?

Patrick Lee's current role is Vice President, CSO Partner Team.

What is Patrick Lee's email address?

Patrick Lee's email address is pl****@****etx.com

What schools did Patrick Lee attend?

Patrick Lee attended Ucla, Pomona College.

What skills is Patrick Lee known for?

Patrick Lee has skills like Drug Discovery, Computational Chemistry, Drug Design, Biotechnology, Medicinal Chemistry, Chemistry, Molecular Modeling, Pharmaceutical Industry, Adme, Life Sciences, High Throughput Screening, Organic Chemistry.

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