Phoebe Chapman

Phoebe Chapman Email and Phone Number

Postdoctoral Research Fellow @ University of Otago
New Zealand
Phoebe Chapman's Location
New Zealand, New Zealand
About Phoebe Chapman

I'm a scientist with wide-ranging interest in pathogens, genomics, diagnostics and wildlife. I have skills and significant training in bioinformatics, with advanced programming ability in R including statistics and data visualisation. I also have experience and training in Bash, Python and SQL, and in molecular lab techniques including DNA extraction, PCR, library prep, CRISPR, and primer/assay design. In addition, I have a background in ecological consulting which brings a number of additional skills in project and budget management, reporting, field surveys, and communication/negotiation.I currently work with genetic and genomic data to investigate microbiota (particularly bacteria and parasites) and their relationships with their hosts. I'm interested in all things related to genetic data analytics and coding, and using them to investigate the natural world.

Phoebe Chapman's Current Company Details
University of Otago

University Of Otago

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Postdoctoral Research Fellow
New Zealand
Website:
otago.ac.nz
Employees:
6347
Phoebe Chapman Work Experience Details
  • University Of Otago
    Postdoctoral Research Fellow
    University Of Otago
    New Zealand
  • University Of Otago
    Postdoctoral Research Fellow
    University Of Otago Mar 2024 - Present
    Dunedin, Otago, New Zealand
    I am currently working in the Fraser lab (Department of Marine Science) on a range of projects relating to kelp microbiomes in subantarctic/Antarctic regions, kelp recolonisation genetics, metabarcoding of sediment samples, and ectoparasite diagnostics.
  • University Of Otago
    Postdoctoral Research Fellow
    University Of Otago Aug 2020 - Mar 2024
    Dunedin, Otago, New Zealand
    Postdoctoral fellow researching the role of the skin microbiome in tail regeneration success in Xenopus laevis tadpoles, including the source of the microbiome and molecular pathways connecting microbe and tadpole. My role involves a combination of assay design, bench work (DNA extraction, PCR, animal handling, regeneration assays, CRISPR-Cas9) and bioinformatic analysis of various data types including prokaryote 16S amplicon, whole genome, and mitochondrial.
  • Jwa Ecological Consultants
    Senior Ecologist
    Jwa Ecological Consultants Mar 2016 - Mar 2021
    Brisbane, Australia
    Senior ecologist for a private boutique environmental consulting firm. During this time, I provided advice to private industry and government clients as the primary scientist on a range of major residential, mining, and infrastructure projects. I undertook flora and fauna surveys and prepared impact assessments and management plans for threatened species and ecosystems within a range of terrestrial and marine environments throughout Queensland and New South Wales. In the process, I was involved in training and mentoring junior staff, managing budgets and writing/reviewing numerous impact assessments, management plans and responses to government information requests.
  • Gyspie Lodge Equestrian Centre
    Instructor
    Gyspie Lodge Equestrian Centre Sep 2008 - Dec 2017
    Instructor giving individual and group lessons in horse riding and horse care/management. Clients ranged from preschool age children through to retiree, with skills levels from beginner to open competitor/advanced. Other duties included lesson scheduling, handling and workshop planning/supervision.
  • The University Of Queensland
    Research Scholar
    The University Of Queensland Jun 2012 - Mar 2017
    School Of Veterinary Science, Gatton, Qld
    PhD candidate researching the diversity, pathology and diagnosis of parasites in endangered marine turtles. I collected parasites from deceased stranded sea turtles obtained through partnerships with rehabilitation organisations such as Australia Zoo and SeaLife (Underwater World) and catalogued/described them using molecular and traditional morphological techniques. This led to investigations into the link between certain genotypes and severe host pathology, as well as options for antemortem infection diagnosis. I successfully developed various assays including single and multiplex conventional PCR, multiplex Taqman realtime PCR, and terminal restriction fragment length polymorphism - PCR. I had the opportunity to collaborate with state govermnment agencies, rehabilitation facilities, wildlife health bodies and international researchers in the USA and around Australia, including on an epizootic resulting in mass mortalities from coccidial infection.
  • The University Of Queensland
    Academic Tutor
    The University Of Queensland Mar 2013 - Jun 2015
    Gatton, Qld
    Tutor in veterinary parasitology - 2nd and 3rd year laboratory sessions in identification and diagnosis. Assist students with microscopy, dichotomous key use, diagnostic techniques.
  • The University Of Queensland
    Academic Tutor
    The University Of Queensland Jun 2014 - Nov 2014
    Gatton, Qld
    Tutor in One Health - first year BSc elective. Guide students through tutorial exercises, assist with assignment planning and group exercises, and facilitate discussions.
  • Jwa Ecological Consultants
    Senior Scientist
    Jwa Ecological Consultants Jan 2007 - Dec 2012
    Brisbane, Australia
    Senior ecologist for a private boutique environmental consulting firm. During this time, I provided advice to private industry and government clients as the primary scientist on a range of major residential, mining, and infrastructure projects. I undertook flora and fauna surveys and prepared impact assessments and management plans for threatened species and ecosystems within a range of terrestrial and marine environments throughout Queensland and New South Wales. In the process, I was involved in training and mentoring junior staff, managing budgets and writing/reviewing numerous impact assessments, management plans and responses to government information requests.
  • The University Of Queensland
    Academic Tutor
    The University Of Queensland Mar 2004 - Jul 2005
    St Lucia, Qld
    Tutor for first year students in zoology practical laboratory classes
  • The University Of Queensland
    Academic Tutor
    The University Of Queensland Mar 2004 - Jul 2004
    St Lucia, Qld
    Tutor for second year Marine Ecology field projects
  • The University Of Queensland
    Academic Tutor
    The University Of Queensland Mar 2004 - Jun 2004
    St Lucia, Qld
    Laboratory tutor for third year fish ecology elective

Phoebe Chapman Education Details

Frequently Asked Questions about Phoebe Chapman

What company does Phoebe Chapman work for?

Phoebe Chapman works for University Of Otago

What is Phoebe Chapman's role at the current company?

Phoebe Chapman's current role is Postdoctoral Research Fellow.

What schools did Phoebe Chapman attend?

Phoebe Chapman attended The University Of Queensland, Curtin University, The University Of Queensland, The University Of Queensland.

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