Rohitha Ravinder Email & Phone Number

Cologne, Nrw, De

Cologne, North Rhine-Westphalia, Germany

Cologne, North Rhine-Westphalia, Germany

- Developed a light-weight Named Entity Recognition (NER) based approach to create document embeddings from a biomedical corpus as part of a framework to compare vector-based approaches for document similarity.- Collaborated with a team of research assistants and developed a pipeline to evaluate the approaches.- Assessed different machine learning portals for their functionality, metadata models, and relevance.- Developed a mini-library to transform BioPortal-like CSV to semantic RDF representations with support for filters/queries and different RDF serializations.

Cologne, North Rhine-Westphalia, Germany

- Developed and defined two novel text-based embedding methods specifically tailored for representing protein function comments.- Conducted a thorough comparison and evaluation of selected text-driven embedding approaches, investigating their potential for improving function prediction tasks.- Created a vector space of protein function-based embeddings, enabling further tasks such as vocabulary analyses.- Constructed a comprehensive dataset of proteins, enabling clustering based on both BLAST sequence similarity and embedding similarity. - Evaluated the effectiveness of text-driven embedding approaches as supportive tools for biologists involved in protein functional annotations.

Hyderabad, Telangana

Trimer Encoding for Enhancing PERF Performance: An Attempt- Researched and studied state-of-the-art algorithms in the domain of long read sequencing- Implemented an algorithm utilizing trimer encoding to detect sequence repeats from genomes

Mumbai Area, India

In Silico molecular docking analysis of Tuberculosis Antigen 85 complex with Antibiotics- Performed Molecular docking to predict antibiotic active sites for Tuberculosis Antigen Ag85 complex using ArgusLab 4.0.1- Compared sequences using ClustalW- Analyzed bioactivity of antibiotics using Molinspiration- Visualized pockets using CastP and checked for the energy values and hydrogen bonds post docking.

Master Of Science - Ms, Life Science Informatics

Bachelor Of Technology, Biotechnology