Data Scientist
Current
Mar 2024 - Present
Who is Ryan Kyger? Overview
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Quick answer
Ryan Kyger is listed as Data Scientist at Amgen, based in Thousand Oaks, California, United States. AeroLeads shows a work email signal at amgen.com and a matched LinkedIn profile for Ryan Kyger.
Ryan Kyger previously worked as Associate Scientist (Contracted via Donatech) at Amgen and PhD Student (Cell & Molecular Biology) at University Of Nevada, Reno. Ryan Kyger holds Master Of Science - Ms, Cell/Cellular And Molecular Biology from San Francisco State University.
Company email context
Email format at Amgen
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{first_initial}{last}@amgen.com
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AeroLeads found 1 current-domain work email signal for Ryan Kyger. Compare company email patterns before reaching out.
Profile bio
About Ryan Kyger
I am a bioinformatics & data scientist. I have experience programming in R, Python, Linux (bash), SQL, C++. I have experience doing next generation sequencing (NGS) data analysis (variant calling, RNAseq, ATACseq, WGS, WGBS, Illumina, Nanopore, PacBio). I have experience with Frequentist & Bayesian statistical methods. I have molecular biology laboratory & experimental design experience. I have an accredited business management certification. I am capable of working independently or collaboratively in functional & cross-functional teams.
Listed skills include Spyder Ide, Bioconductor, R Shiny, Rnaseq Analysis, and 38 others.
Current workplace
Ryan Kyger's current company
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5 roles
Ryan Kyger work experience
A career timeline built from the work history available for this profile.
Associate Scientist (Contracted Via Donatech)
• Completed genomic DNA sequence variant analysis using fastp, bwa, GATK, octopus, samtools, bcftools, SnpEff, shinyGO on Illumina short-read whole genome sequence (WGS) data from different CHO cell lines on an AWS EC2 Linux instance to measure genetic differences between the cell lines. • Completed genomic DNA sequence variant analysis using fastp, pbmm2, GATK, pbsv on Pacific Biosciences (PacBio) HiFi long-read whole genome sequence (WGS) data from different CHO cell lines on an AWS EC2 Linux instance to measure genetic differences between the cell lines. • Completed differential expression analysis using a nextflow nfcore rnaseq pipeline (FastQC, STAR, stringtie, salmon), DESeq2, pathfindR on bulk RNAseq data (Illumina) from different CHO cell lines on an AWS EC2 Linux instance to measure mRNA expression differences between the cell lines.• Completed ATACseq analysis of CHO cells using a nextflow nfcore atacseq pipeline, HMMRATAC on an AWS EC2 Linux instance. • Completed Oxford Nanopore long-read structural variant calling using pycoQC, minimap2, NGMLR, SVIM, sniffles, cuteSV on an AWS EC2 Linux instance. • Collaborated with team members to develop an automated variant calling pipeline using fastp, bwa, GATK, octopus, lofreq, samtools, bcftools, SnpEff, that runs on AWS EC2 Linux instances, for protein quality control.• Collaborated with cross-functional team members to develop machine learning models to predict high protein producing CHO cell clones.• Completed de novo assembly of DNA sequences of proteins using MEGAHIT, Flye. • Created heatmaps of Nanostring nCounter gene expression data using R. • Developed an R script that outputs an interactive visualization & regression of mutation frequency vs time data.• Documented code in company GitLab repositories.
Jun 2021 - Mar 2024
Phd Student (Cell & Molecular Biology)
• Published discovery that myxozoans (parasitic jellyfish) lack cytosine DNA methylation, by analyzing Whole Genome Bisulfite Sequence (WGBS) data (DOI: http://dx.doi.org/10.1093/molbev/msaa214).
Aug 2018 - Feb 2020
Master’S Student
• Investigated the Endoplasmic Reticulum in D. melanogaster embryos, using molecular biology & fluorescence microscopy.
Aug 2015 - Jun 2017
Undergraduate Student & Laboratory Assistant
• Investigated Kinesin-5 motor proteins in S. cerevisiae, using molecular biology, biochemistry, & fluorescence microscopy.
Jun 2014 - Jul 2015
Team & coworkers
Colleagues at Amgen
Other employees you can reach at amgen.com. View company contacts →
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Angel De León Camps
Colleague at AmgenPuerto Rico
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RH
Ryan Hull
Colleague at AmgenHope, Rhode Island, United States
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AH
Aisha Huang
Colleague at AmgenGreater Philadelphia, United States
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SV
Sylvia Vong
Colleague at AmgenWashington Dc-Baltimore Area, United States
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JM
Junius Moyler Iii
Colleague at AmgenChesapeake, Virginia, United States
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AC
Ana Clary
Colleague at AmgenThousand Oaks, California, United States
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CC
Claire C.
Colleague at AmgenIreland
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WD
Wanda Diaz
Colleague at AmgenGuayama, Puerto Rico
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KG
Kayla Galbraith Paltoo
Colleague at AmgenGreater Tampa Bay Area, United States
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CA
Carla Arts
Colleague at AmgenEindhoven, North Brabant, Netherlands
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Angel De León Camps
Colleague at AmgenPuerto Rico
View →
RH
Ryan Hull
Colleague at AmgenHope, Rhode Island, United States
View →
AH
Aisha Huang
Colleague at AmgenGreater Philadelphia, United States
View →
SV
Sylvia Vong
Colleague at AmgenWashington Dc-Baltimore Area, United States
View →
JM
Junius Moyler Iii
Colleague at AmgenChesapeake, Virginia, United States
View →
AC
Ana Clary
Colleague at AmgenThousand Oaks, California, United States
View →
CC
Claire C.
Colleague at AmgenIreland
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WD
Wanda Diaz
Colleague at AmgenGuayama, Puerto Rico
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KG
Kayla Galbraith Paltoo
Colleague at AmgenGreater Tampa Bay Area, United States
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CA
Carla Arts
Colleague at AmgenEindhoven, North Brabant, Netherlands
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4 education records
Ryan Kyger education
Master Of Science - Ms, Cell/Cellular And Molecular Biology
San Francisco State University
Professional Certificate, Business Management
Uc Riverside Extension
Specialized Certificate, Applied Bioinformatics
Uc San Diego Extended Studies
Bachelor Of Science - Bs, Cell/Cellular And Molecular Biology
University Of California, Davis
FAQ
Frequently asked questions about Ryan Kyger
Quick answers generated from the profile data available on this page.
What company does Ryan Kyger work for?
Ryan Kyger works for Amgen.
What is Ryan Kyger's role at Amgen?
Ryan Kyger is listed as Data Scientist at Amgen.
What is Ryan Kyger's email address?
AeroLeads has found 1 work email signal at @amgen.com for Ryan Kyger at Amgen.
Where is Ryan Kyger based?
Ryan Kyger is based in Thousand Oaks, California, United States while working with Amgen.
What companies has Ryan Kyger worked for?
Ryan Kyger has worked for Amgen, University Of Nevada, Reno, San Francisco State University, and University Of California, Davis.
Who are Ryan Kyger's colleagues at Amgen?
Ryan Kyger's colleagues at Amgen include Angel De León Camps, Ryan Hull, Aisha Huang, Sylvia Vong, and Junius Moyler Iii.
How can I contact Ryan Kyger?
You can use AeroLeads to view verified contact signals for Ryan Kyger at Amgen, including work email, phone, and LinkedIn data when available.
What schools did Ryan Kyger attend?
Ryan Kyger holds Master Of Science - Ms, Cell/Cellular And Molecular Biology from San Francisco State University.
What skills is Ryan Kyger known for?
Ryan Kyger is listed with skills including Spyder Ide, Bioconductor, R Shiny, Rnaseq Analysis, R, Git, Public Speaking, and Linux.
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