Ivan Shabalin, Phd

Ivan Shabalin, Phd Email and Phone Number

Associate Director, Head of Structural Biology @ IDEAYA Biosciences
Ivan Shabalin, Phd's Location
San Francisco Bay Area, United States, United States
Ivan Shabalin, Phd's Contact Details

Ivan Shabalin, Phd work email

Ivan Shabalin, Phd personal email

n/a
About Ivan Shabalin, Phd

I am a passionate structural biologist and drug discovery expert with a PhD in biochemistry and over 19 years of experience in structural biology, protein biophysics, and protein chemistry. My work has resulted in over 50 scientific publications and over 1600 citations (https://scholar.google.com/citations?user=6QPLRkMAAAAJ&hl=en).Currently, I lead the Structural Biology group at IDEAYA Biosciences, a leading precision medicine oncology company. I oversee both in-house capabilities and outsourcing via CROs to provide comprehensive structural biology support through crystallography and CryoEM. My work directly informs lead discovery and guides fast lead optimization across multiple programs. Additionally, I serve as a Project Team Lead on an early-stage pre-clinical program with extensive collaboration across teams.I have a strong track record of structural enablement for a range of projects, delivering a robust stream of co-crystal structures to drive structure-based drug design across multiple fast-paced programs, advancing the understanding of the mechanism of action of precision medicine oncology drugs, and collaborating across teams as a Structural Biologist, Lead Discovery Representative, and a Project Team Lead.Before pivoting to Industry, I demonstrated continuous research success in academic settings, where I co-authored 47 scientific articles and 3 book chapters (over 1600 citations: https://scholar.google.com/citations?user=6QPLRkMAAAAJ&hl=en), deposited 120+ crystal structures to the PDB, developed and instructed courses on protein crystallography, and supervised 14 students.

Ivan Shabalin, Phd's Current Company Details
IDEAYA Biosciences

Ideaya Biosciences

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Associate Director, Head of Structural Biology
Ivan Shabalin, Phd Work Experience Details
  • Ideaya Biosciences
    Associate Director, Head Of Structural Biology
    Ideaya Biosciences Jan 2024 - Present
    South San Francisco, California, Us
    • Leading Structural Biology Group (Lead Discovery) to leverage internal capacity and efficient CROs for crystallography and CryoEM• Providing comprehensive structural biology support for several programs to guide structural biology strategy, lead discovery, and lead optimization• Leading an early-stage first-in-class program (Project Team Lead). Applying principles learned from UVa Leadership courses to enhance team efficiency and productivity through cross-functional collaboration, transparency, empowerment, regular alignment with leadership, and strategic agility
  • Ideaya Biosciences
    Senior Principal Research Scientist
    Ideaya Biosciences Apr 2021 - Jan 2024
    South San Francisco, California, Us
    • Provided broad structural biology support for several projects to guide medchem lead optimization and advance the understanding of the mechanism of action of precision medicine oncology drugs• Delivered a robust stream of co-crystal structures to drive fast structure-based drug design cycles across several projects• Significantly enhanced internal capacity by procuring equipment and software, and by developing robust data management workflows, including data storage, transfer, and ELN integration• Identified and onboarded high-performing CROs for crystallography and CryoEM, driving a rapid expansion of efficient outsourcing• Served as an early co-PTL and later as a Lead Discovery representative in a core team
  • University Of Virginia
    Assistant Professor Of Research/Research Scientist/Research Associate
    University Of Virginia May 2011 - May 2021
    Charlottesville, Va, Us
    • Co-authored 35 peer-reviewed publications in the field of structural biology (1600+ citations: https://scholar.google.com/citations?user=6QPLRkMAAAAJ&hl=en), including expert-opinion publications, guidelines for crystal structure refinement, and a protocol for characterizing metal-binding sites in proteins with X-ray crystallography • Crystallized and determined structures for 60+ proteins. Developed an integrative protocol for highly efficient protein crystallization (45% success rate for a set of 95 proteins) and rapid structure determination with high quality• Coordinated 5 collaborative research projects performed by 15+ participants at UVa and other institutions• Mentored 5 PhD, 2 MSc, and 7 undergraduate students. Taught and supervised protein crystallization and structure refinement (80+ structures, 25+ participants). Organized synchrotron trips• Presented 7 invited lectures on best practices in data processing, structure refinement, and structure validation at workshops and conferences. Developed and instructed two courses/tutorials on protein crystallography• Supervised structural and biophysical characterization of serum albumin as a major transporter of metals, hormones, and drugs in mammalian blood plasma, including structural characterization of serum albumin as a major transporter of dexamethasone in COVID-19 therapy. Albumin complexes with 15 FDA-approved drugs solved• Conducted evaluation and re-refinement of 160+ previously deposited structures of protein-ligand complexes (drug targets or complexes with drugs) and contributed to the public resource for expertly validated SARS-CoV-2 structures for drug discovery• Performed purification and conducted biochemical and biophysical characterization (ITC, TSA, DLS, Enzyme kinetics) of proteins from pathogens• Surveyed Mg binding sites in RNA crystal structures. Co-developed a protocol for Mg sites validation and employed a classification system available as MgRNA server
  • A.N. Bach Institute Of Biochemistry
    Research Scientist
    A.N. Bach Institute Of Biochemistry Jun 2010 - May 2011
    • Performed maintenance of Rigaku CrystalMation system (Minstrel HT, two Gallery 700 Incubators, Alchemist II, Phoenix RE)• Performed crystallization studies for 10 proteins, including crystallization in space
  • A.N. Bach Institute Of Biochemistry
    Research Assistant/Phd Student
    A.N. Bach Institute Of Biochemistry Aug 2006 - Jun 2010
    • Crystallized and determined 7 structures of formate dehydrogenase from 3 organisms• Co-investigated formate dehydrogenase mechanism of action with QM/MM and docking• Performed protein crystallization in microgravity in collaboration with JAXA (Japan). Crystals for 5 proteins grown on the International Space Station

Ivan Shabalin, Phd Skills

X Ray Crystallography Biochemistry Protein Purification Structural Biology Molecular Biology Protein Expression Western Blotting Protein Chemistry Crystallography Crystallization Cell Culture Molecular Cloning Pcr Science Purification Biophysics Biotechnology Microscopy Scientific Writing Fluorescence Tissue Culture Fluorescence Microscopy Drug Discovery Sequence Analysis Rt Pcr Chromatography Electrophoresis Dna Extraction Immunology Cell Fplc Hplc Genomics Sds Page In Vitro Gel Electrophoresis Proteomics Rna Isolation Protein Engineering Elisa Genetics Qpcr Immunofluorescence Immunoprecipitation Chemistry Molecular Modeling Immunoassays Flow Cytometry Immunohistochemistry Computational Biology

Ivan Shabalin, Phd Education Details

  • University Of Virginia
    University Of Virginia
    Leadership And Project Management
  • A.N. Bach Institute Of Biochemistry
    A.N. Bach Institute Of Biochemistry
    Chemistry (Biochemistry And Structural Biology)
  • Lomonosov Moscow State University (Msu)
    Lomonosov Moscow State University (Msu)
    Bioorganic Chemistry

Frequently Asked Questions about Ivan Shabalin, Phd

What company does Ivan Shabalin, Phd work for?

Ivan Shabalin, Phd works for Ideaya Biosciences

What is Ivan Shabalin, Phd's role at the current company?

Ivan Shabalin, Phd's current role is Associate Director, Head of Structural Biology.

What is Ivan Shabalin, Phd's email address?

Ivan Shabalin, Phd's email address is sh****@****.ras.ru

What schools did Ivan Shabalin, Phd attend?

Ivan Shabalin, Phd attended University Of Virginia, A.n. Bach Institute Of Biochemistry, Lomonosov Moscow State University (Msu).

What are some of Ivan Shabalin, Phd's interests?

Ivan Shabalin, Phd has interest in Children, Economic Empowerment, Civil Rights And Social Action, Politics, Environment, Education, Science And Technology, Human Rights, Health.

What skills is Ivan Shabalin, Phd known for?

Ivan Shabalin, Phd has skills like X Ray Crystallography, Biochemistry, Protein Purification, Structural Biology, Molecular Biology, Protein Expression, Western Blotting, Protein Chemistry, Crystallography, Crystallization, Cell Culture, Molecular Cloning.

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