Shawn Bauer

Shawn Bauer Email and Phone Number

Senior Director of Product Management - Discovery - Cloud Platform @ Exelixis
South San Francisco, CA
Shawn Bauer's Location
Pacifica, California, United States, United States
Shawn Bauer's Contact Details

Shawn Bauer personal email

About Shawn Bauer

Experienced Content Manager with a demonstrated history of working in the biotechnology industry. Strong research professional skilled in Biotechnology, Small Molecules, Life Sciences, Medicinal Chemistry, and Lead Change.

Shawn Bauer's Current Company Details
Exelixis

Exelixis

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Senior Director of Product Management - Discovery - Cloud Platform
South San Francisco, CA
Website:
exelixis.com
Employees:
51
Shawn Bauer Work Experience Details
  • Exelixis
    Senior Director, Product Management, Discovery - Cloud Platform
    Exelixis Apr 2024 - Present
    Alameda, California, Us
  • Qiagen
    Director - Content Engineering
    Qiagen Apr 2021 - Mar 2024
    Venlo, Limburg, Nl
    • Lead a team of managers, leads, and contributors responsible for scientific data modeling and integration intoDiscovery and Clinical products.• Successfully coached individual contributors to senior manager level roles, helping them realize career developmentplans.• Maintain and test content within the QIAGEN Knowledge Base to support quarterly and weekly releases.• Supervised development and optimization of machine learning (ML) methods used for literature selection andintegration into products.• Work with product owners, project managers, and outside customers to develop requirements for scientific featuredevelopment.• Develop and test protocols and SOPs for content acquisition to ensure it is consistent with requirements.• Provide end-to-end testing of new features, enhancements, and fixes to ensure they are scientifically consistent withthe intended uses.• Established scientific testing group for QIAGEN QCI-I and integrated this function within the existing productdevelopment and release framework.• Revamped existing test framework to reduce redundancy.• Updated and created workflows that are more efficient to facilitate testing for on-time releases.• Integrated scientific testing personnel within overall testing groups.• Oversaw the Quality Management Representative and Risk Manager for the ISO 13485/IVDR team.
  • Qiagen
    Associate Director - Content Engineering
    Qiagen Apr 2020 - Apr 2021
    Venlo, Limburg, Nl
  • Qiagen
    Manager - Content And Bioinformatics
    Qiagen Apr 2016 - Apr 2020
    Venlo, Limburg, Nl
    Core team member on products and work directly with Product Owners and Product Managers on feasibility investigations and requirements for new features and enhancements.Project team member for numerous customer-specific services engagements, responsible for engaging customer, developing and clarifying requirements, and delivering on-time, well-tested implementations.Responsible for implementation of ISO 9001 Quality Management System for content acquisition and software development.Work with team members to develop and realize career development plans including growth from individual contributor to manager.Manage a team of nine scientists responsible for development of content requirements, implementation, and testing for three QIAGEN Bioinformatics products: Ingenuity Pathway Analysis (IPA), Ingenuity Variant Analysis (IVA), and QIAGEN Clinical Insight-Interpret (QCI-I).• Work with product owners, project managers, and outside customers to develop requirements for scientific feature development.• Perform investigations, provide domain expertise, and act as subject-matter experts for QIAGEN Bioinformatics products. Oversee and manage a team of eight bioinformaticians responsible for data modeling and content pipeline for IPA, IVA, QCI-I, and OmicSoft ArraySuite products.• Maintain and test content within the QIAGEN Knowledge Base to support quarterly and weekly releases.• Design and implement modeling changes for new product features and enhancements. • Supervised development and optimization of machine learning (ML) methods used for literature selection.Established scientific testing group for QIAGEN QCI-I and integrated this function within the existing product development and release framework.• Updated and created workflows that are more efficient to facilitate testing for on-time releases.• Integrated scientific testing personnel within overall testing groups. • Provide end-to-end testing of new features, enhancements, and bug fixes.
  • Ingenuity Systems
    Associate Staff Ontology Engineer
    Ingenuity Systems Apr 2015 - Mar 2016
    • Improved oncology drug approval, guideline, and clinical trial coverage based on customer requirements to support QCI-I application.• Developed a revised finding model for support of multiple variants for the mutation extraction project. Coordinated implementation with project management, curation group, and application developers, resulting in on-time completion.• Created a model for computational export of genetic dependencies for disease/tumor classes, underspecified variants, fusion protein(s), and copy number variants.
  • Ingenuity Systems
    Senior Ontology Engineer
    Ingenuity Systems Jan 2013 - Apr 2015
    • Responsible for treatment related and pharmacogenetics related exports as well as Pathway Knowledge Base/OpenBEL quarterly exports including customer communication and support.• Experience with Python, Perl, Java, SQL, and ask/tell ontology query language including writing imports of external databases for incremental update of content and working with various scientific APIs (PubMed, PubChem, DailyMed) and other APIs such as Google Docs.• Experience in working with chemoinformatics libraries: Open Babel (Java), CDK (Java), and PerlMol (Perl).• Worked in an agile programming environment supported with TargetProcess, JIRA/Confluence, Hudson/Jenkins, and Apache Subversion (SVN).
  • Portola Pharmaceuticals
    Director, Medicinal Chemistry
    Portola Pharmaceuticals Dec 2010 - Nov 2012
    South San Francisco, Ca, Us
    • Co-initiated the JAK3 program. Started chemistry efforts, then guided lead optimization efforts in two templates improving selectivity against JAK family kinases and overall panel selectivity, with increased bioavailability.• Pursued lead-optimization to identify a backup to PRT062607. Identified modifications which imparted decreased off-target activity and improved whole-blood activity. • Coordinated patent writing and the drafting of patent claims.• Worked to start the in-house automated screening group to facilitate optimization of on-target and off-target kinase activity using Z-LYTE and ultraLANCE assay systems.• Responsible for administration of the discovery database (Accelrys AEI) and query / browsing software (Dotmatics Browser & Vortex).
  • Portola Pharmaceuticals
    Senior Scientist - Staff Scientist
    Portola Pharmaceuticals Nov 2003 - Dec 2010
    South San Francisco, Ca, Us
    • Performed medicinal chemistry optimization of a small molecule inhibitor of P2Y12 leading to the selection of PRT060128 (elinogrel).• In the elinogrel backup program explored non-sulfonylurea motifs of lead P2Y12 templates which led to the identification of backup candidates PRT060592 and PRT060674. • Identified a novel Syk kinase inhibitor template which was then optimized to increase plasma based cellular potency and improved clearance and half-life, leading to the selection of PRT062070 as a preclinical candidate.
  • Millennium Pharmaceuticals
    Senior Scientist
    Millennium Pharmaceuticals Mar 2002 - Nov 2003
    Cambridge, Ma, Us
    • Performed medicinal chemistry optimization of three structurally distinct templates for the Factor Xa program; developed SAR, modified templates to optimize efficacy, toxicological and pharmacokinetic characteristics.• Imported and implemented automated purification systems (HPLC and MPLC), coordinated laboratory equipment responsibilities.
  • Cor Therapeutics
    Scientist - Senior Scientist
    Cor Therapeutics Feb 2001 - Mar 2002
    • Managed all chemistry aspects of template optimization and coordinated pharmacological testing of inhibitors which led to the discovery of a potent, selective and patentable orally active small molecule Factor Xa inhibitor.
  • Berlex Biosciences / Schering Ag
    Scientist - Medicinal Chemistry
    Berlex Biosciences / Schering Ag 1998 - 2001
    Us
    • Performed medicinal chemistry optimization of lead compounds for potency, efficacy, and bioavailability against cardiovascular and inflammation targets: PAI-1 (serpin), Sphingomyelinase (phosphodiesterase), Lipoxin A4 receptor.• Successfully developed and prototyped multi-step solid phase and solution phase libraries for parallel synthesis.• Performed initial process research of drug candidate optimizing reactions and eliminating chromatographic steps• Worked with 500+ gram material quantities.• Validated small molecule drug screening hits by performing initial structural activity relationships.

Shawn Bauer Skills

Medicinal Chemistry Chromatography Hplc Drug Discovery Assay Development Purification Lead Change Small Molecules Pharmaceutical Industry Lifesciences Biopharmaceuticals Pharmacokinetics Chemistry Parallel Synthesis Biotechnology Life Sciences Drug Development Biochemistry Clinical Development

Shawn Bauer Education Details

  • Ucla
    Ucla
    Chemistry
  • Kansas State University
    Kansas State University
    Psychology

Frequently Asked Questions about Shawn Bauer

What company does Shawn Bauer work for?

Shawn Bauer works for Exelixis

What is Shawn Bauer's role at the current company?

Shawn Bauer's current role is Senior Director of Product Management - Discovery - Cloud Platform.

What is Shawn Bauer's email address?

Shawn Bauer's email address is sh****@****ail.com

What schools did Shawn Bauer attend?

Shawn Bauer attended Ucla, Kansas State University.

What skills is Shawn Bauer known for?

Shawn Bauer has skills like Medicinal Chemistry, Chromatography, Hplc, Drug Discovery, Assay Development, Purification, Lead Change, Small Molecules, Pharmaceutical Industry, Lifesciences, Biopharmaceuticals, Pharmacokinetics.

Who are Shawn Bauer's colleagues?

Shawn Bauer's colleagues are David L., Robert Mcbride, Patrick Millet, Claire Nicholson, Fironica Lao, Dina Pellegrino, Darnell Turner.

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