Machine Learning Intern
Discrete Conditional Generative Models for In-Silico Antibody Variant Design
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Stephen Lu is listed as CS & Biology @ McGill ‘24 | Schulich Leader ‘21 | 8VC Fellow ‘24 based in Montreal, Quebec, Canada. AeroLeads shows a matched LinkedIn profile for Stephen Lu.
Stephen Lu previously worked as Machine Learning Intern at Bighat Biosciences and Research Intern at Mila - Quebec Artificial Intelligence Institute. Stephen Lu holds Bachelor Of Science - Bs, Computer Science And Biology, 4.0/4.0 from Mcgill University.
ML + Biomoleculeshttps://matrixmaster.me/
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San Mateo, California, United States
Discrete Conditional Generative Models for In-Silico Antibody Variant Design
Montreal, Quebec, Canada
Ongoing Project: Gflownets for phenomics guided small molecules discovery• Supervised by Michał Koziarski and Yoshua BengioPrevious Project: Greedier Gflownets using mixture policy with RL• Implemented various RL baselines such as DQN, SAC, A2C, and QGFN• Setup task environments (ex: bit sequences) and ran hyperparameter search experiments• Made improvements to cleanup codebase and facilitate visualizing and running experiments• Co-author on ICML paper: QGFN: Controllable Greediness with Action Values• Supervised by Elaine Lau and Emmanuel Bengio
Toronto, Ontario, Canada
Project: Evaluating the benefits and limitations of LLMs in clinical context• Setup a conversational Q&A agent with chat history and semantic document retrieval in LangChain.• Deployed a vector database using Zep with ingestion pipeline for adding new searchable text documents.• Built a dashboard & chat interface in SvelteKit for patients to interact with the augmented language model.Supervised by Dr. Devin Singh
Greater Toronto Area, Canada
• Designed a server-side rendering library that produces interactive React components from static JSON schemas, enabling the team to deliver near real-time frontend updates through a low-code platform.• Hired and onboarded three full-time frontend developers and organized weekly scrum, sprints, and code reviews.• Deployed dashboards, mobile app, and web app to 80 000+ yearly patient users and 5 000+ hospital staff users.
Montreal, Quebec, Canada
Project: Exploring the transcriptional mediators of stress in the nucleus acumbens• Clustered single-cell RNA-seq data in Scanpy using KNN, NMF, and Louvain methods.• Produced heatmap, violin, and dot plot visualizations to identify differentially expressed genes• Trained multiview pose estimation models on mice videos using DeepLabCut
I participated in the NeuroTechX, and iGEM academic clubs. I took courses under the CS and Biology joint program including representation.
Activities and Societies: Competitive Programming, Basketball I spent an exchange semester abroad at the National University of Singapore..
Activities and Societies: Discrete Math, Linear Algebra, Probability, Statistics, Honours Graph Theory
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Stephen Lu is listed as CS & Biology @ McGill ‘24 | Schulich Leader ‘21 | 8VC Fellow ‘24.
Stephen Lu is based in Montreal, Quebec, Canada.
Stephen Lu has worked for Bighat Biosciences, Mila - Quebec Artificial Intelligence Institute, T-Cairem, Hero Ai, and Mcgill University.
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Stephen Lu holds Bachelor Of Science - Bs, Computer Science And Biology, 4.0/4.0 from Mcgill University.
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