Susmitha Shankar, Ph.D. Email & Phone Number

Melbourne, Victoria, Australia

Mainz, Rhineland-Palatinate, Germany

➨Developing end-to-end pipeline for annotating, preprocessing, managing and effectively storing multi-omic large biological data from various sequencing techniques from yeast and human cell lines.➨Deciphering the factors affecting the localization of transmembrane proteins using statistical analysis and effective visualization➨Inferring sequence and biophysical properties that help in C terminal and N terminal-based protein degradation using deep learning and natural language processing (NLP) model and their optimization.

Bengaluru Area, India

Project Title: Drug Repurposing Hyper-layer Scalable Multi-Paradigm Drug Repurposing WorkbenchFunded By: Department of Biotechnology, Ministry of Science & Technology, Government of IndiaAdvisor: Dr. Prashanth Athri➨Use of efficient machine learning and statistical approaches for critical analysis of the use of genomic and transcriptomic data from sources such as LINCS L1000 project in drug repurposing➨Detailed understanding of various therapeutic effects of small-molecular drugs and their prediction using various machine learning and network-based models➨Theoretical understanding of NGS Sequencing technology and hands-on experience working on various hypothesis generation on X-omics data➨Involved study of various chemical and molecular fingerprints

Bengaluru Area, India

Funded By: Amrita Center for Research and DevelopmentAdvisor: Dr. Prashanth Athri➨Exploration of various statistical techniques, database integration and working knowledge of genomics – in analysis of RNA-seq data, drug databases as well as protein-protein interaction databases

Doctor Of Philosophy - Phd, Biomathematics, Bioinformatics, And Computational Biology, 1.0

Thesis title: Dissecting specificity of Short Linear Motifs in Protein Quality Control Biostatistics Experimental Methods in System.

Master Of Technology - Mtech, Computer Science, 9.01/10

Thesis Title: Development of effective data integration techniques for drug-based information management system Foundations of Computer.

Bachelor Of Technology - Btech, Computer Science And Engineering, 8.55/10

Activities and Societies: FocalCXM Pvt. Lmt CCNA Executive member of Forum for Aspiring Computer Engineers Member of Computer Society.

Education record

Activities and Societies: Quiz CompetitionHealth and Hygiene, Vice Captain, 2010 Engish Language, captain, 2011 won various school.