Vishwanath Kumar

Vishwanath Kumar Email and Phone Number

Bioinformatician
Vishwanath Kumar's Location
Bengaluru, Karnataka, India, India
About Vishwanath Kumar

Bioinformatics enthusiast with 4 years experience of working in the research industry. Skilled in Biological Data Analysis (Genome sequencing, RNA, sRNA sequencing, MicroArray), Statistical analysis and Programming/Scripting languages like R, Python, Perl, Java and Shell. Strong Engineering professional with a Master's degree focused in Bioinformatics from Institute of Bioinformatics and Applied Biotechnology.

Vishwanath Kumar's Current Company Details

Bioinformatician
Vishwanath Kumar Work Experience Details
  • Medgenome
    Bioinformatics Analyst Ii
    Medgenome Oct 2021 - Jul 2022
    Bengaluru, Karnataka, India
    ● Worked on migrating the large Annotation source data to NoSQL to ensure data redundancy,integrity and security in Python.● Performed QA activities for Variant calling and Annotation software developed internally.● Migrated redmine data from one server to another and hosted the server in linux environment.● Validated the raw data and the parsed sequencing data to be sent to customers.● Created an internal database of the customer’s data using MongoDB to query… Show more ● Worked on migrating the large Annotation source data to NoSQL to ensure data redundancy,integrity and security in Python.● Performed QA activities for Variant calling and Annotation software developed internally.● Migrated redmine data from one server to another and hosted the server in linux environment.● Validated the raw data and the parsed sequencing data to be sent to customers.● Created an internal database of the customer’s data using MongoDB to query outinformation about all the analyses completed successfully. Show less
  • Thermo Fisher Scientific
    Software Domain Engineer I
    Thermo Fisher Scientific Jul 2019 - Oct 2021
    Bengaluru, Karnataka, India
    • Worked with Stakeholders and bioinformatics team to design and validate the new features, analysed the trends in the data generated by Ion Torent and Genuxes Application for the NGS pipeline• Performed robust data validation of Annotation Sources in NoSQL databases like MongoDB, PostgreSQL• Validated results which were generated at different stages of analyses in different panels are reproducible.• Prepared concise documentation, presentations of Clinical and Functional… Show more • Worked with Stakeholders and bioinformatics team to design and validate the new features, analysed the trends in the data generated by Ion Torent and Genuxes Application for the NGS pipeline• Performed robust data validation of Annotation Sources in NoSQL databases like MongoDB, PostgreSQL• Validated results which were generated at different stages of analyses in different panels are reproducible.• Prepared concise documentation, presentations of Clinical and Functional annotations provided by tool, accomplished feature validation of data archival/restore & ensuring data reproducibility.• Collaborated between QA and Software Developers to understand the functionality of the product• Raised and managed defects identified during Software development phase using Scrum, Agile methodologies• Worked on Kaizen, PPI projects to improve overall Product Testing cycle and data integrity• Awarded You Made A Difference award for showcasing 4i values. Show less
  • Institute Of Bioinformatics And Applied Biotechnology (Ibab)
    Graduate Researcher
    Institute Of Bioinformatics And Applied Biotechnology (Ibab) Dec 2018 - Jun 2019
    Bengaluru, Karnataka, India
    Project : Building a context dependant sRNA regulatory network to understand Mycobacterium tuberculosis stress conditionsUnderstanding the role of sRNAs and the genes which were targeted and regulated bythem under different stress conditions using the sRNA-seq and RNA-seq data. Identifiedthe highly confident sRNAs, then based on sequence complementarity identified thegenes targeted using IntaRNA. Then studied the expression of sRNAs and genes in theirrespective stress… Show more Project : Building a context dependant sRNA regulatory network to understand Mycobacterium tuberculosis stress conditionsUnderstanding the role of sRNAs and the genes which were targeted and regulated bythem under different stress conditions using the sRNA-seq and RNA-seq data. Identifiedthe highly confident sRNAs, then based on sequence complementarity identified thegenes targeted using IntaRNA. Then studied the expression of sRNAs and genes in theirrespective stress conditions like Low Iron, Nutrient starvation. Performed networkanalyses to identify the clusters and motifs of important sRNAs and genes in differentstress conditions and also the pathways being regulated. Show less
  • Anna University Chennai
    Bioinformatics Intern
    Anna University Chennai May 2018 - Jun 2018
    Chennai, Tamil Nadu, India
    Learnt about GROMACS and developed a pipeline.Learnt about Pymol and Chimera to study the structures of proteins.
  • Anna University Chennai
    Graduate Researcher
    Anna University Chennai Dec 2016 - May 2017
    Chennai, Tamil Nadu, India
    Project : Production of Cellulase from Trichoderma reesei for Biodiesel applications
  • Cancer Institute Adyar
    Summer Intern
    Cancer Institute Adyar Jun 2015 - Jul 2015
    Chennai, Tamil Nadu, India
    Underwent trainings using Electron Microscopy
  • Biolim Centre For Science & Technology
    Summer Intern
    Biolim Centre For Science & Technology May 2015 - Jun 2015
    Chennai, Tamil Nadu, India
    Underwent training in industrial Fermentation processes

Vishwanath Kumar Skills

Python Fermentation Technology Java Sql R Microsoft Excel Bioinformatics Agile Methodologies Genome Sequencing Biological Data Analysis Statistical Analysis C++ Web Scraping Shell Scripting Genomics

Vishwanath Kumar Education Details

Frequently Asked Questions about Vishwanath Kumar

What is Vishwanath Kumar's role at the current company?

Vishwanath Kumar's current role is Bioinformatician.

What schools did Vishwanath Kumar attend?

Vishwanath Kumar attended Institute Of Bioinformatics And Applied Biotechnology (Ibab), Anna University Chennai.

What skills is Vishwanath Kumar known for?

Vishwanath Kumar has skills like Python, Fermentation Technology, Java, Sql, R, Microsoft Excel, Bioinformatics, Agile Methodologies, Genome Sequencing, Biological Data Analysis, Statistical Analysis, C++.

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