Associate Director Of Genome Informatics
Current
Aug 2022 - Present
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Nathan Watson-Haigh Email & Phone Number
Associate Director of Genome Informatics at Alkahest | Adelaide, Australia | Linux, Workflows & Reproducibility
at
Alkahest, Inc.
1 work email found
@alkahest.com
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Current company
Role
Associate Director of Genome Informatics at Alkahest | Adelaide, Australia | Linux, Workflows & Reproducibility
Location
Greater Adelaide Area, Australia, Australia
Company size
Who is Nathan Watson-Haigh? Overview
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Nathan Watson-Haigh is listed as Associate Director of Genome Informatics at Alkahest | Adelaide, Australia | Linux, Workflows & Reproducibility at Alkahest, Inc., a company with 75 employees, based in Greater Adelaide Area, Australia, Australia. AeroLeads shows a work email signal at alkahest.com and a matched LinkedIn profile for Nathan Watson-Haigh.
Nathan Watson-Haigh previously worked as Associate Director of Genome Informatics at Alkahest, Inc. and Education Sub-Committee at Abacbs - Australian Bioinformatics And Computational Biology Society. Nathan Watson-Haigh holds Phd, Bioinformatics from University Of York.
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Profile bio
About Nathan Watson-Haigh
Nathan has almost 20 years' experience in the field of bioinformatics with expertise in cereal genomics, transcriptomics, system biology, phylogenetics, bioinformatics training, Linux sysadmin, pipeline development, high-performance and cloud computing.Nathan's background was first in biology, by undergraduate training, and then in bioinformatics by PhD. During his PhD he investigated the location of the root, the oldest part, of the eukaryotic tree of life. At this time he was also exposed to high-performance computing infrastructure and the Linux operating system.Following his PhD he took up a bioinformatics postdoctoral position on a project looking at the range margins of Arabidopsis lyrata ssp. petraea. During this time, Nathan was responsible for the systems administration of several Linux machines and was first exposed to metabolomics data analysis.Nathan then joined CSIRO as a postdoctoral research fellow using system biology approaches to investigate complex production traits in livestock species.Nathan got his first taste of Next Generation Sequencing (NGS) data when he joined the Australian Wine Research Institute (AWRI) as a senior bioinformatician. It was here where he spearheaded efforts to establish an unincorporated bioinformatics interest group in South Australia (BIG SA) and led the establishment of a cloud-based Bioinformatics Training Platform (BTP) in collaboration with Bioplatforms Australia (BPA), CSIRO Bioinformatics Core and the European Bioinformatics Institute (EBI).Nathan joined the ACPFG in the School of Ag, Food & Wine in late 2013. He played a pivotal role in the development and application of analytical approaches and pipelines to NGS-based wheat genomics data sets. He was responsible for setting up and managing the Linux-based scientific computing infrastructure, including several large memory compute nodes configured as a Slurm cluster, 100's TBytes of clustered filesystem storage and around 2 dozen virtual machines.
Listed skills include Bioconductor, Genome Assembly, R, Git, and 40 others.
Current workplace
Nathan Watson-Haigh's current company
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Alkahest, Inc.
18 roles
Nathan Watson-Haigh work experience
A career timeline built from the work history available for this profile.
Education Sub-Committee
Current
Mar 2019 - Present
Associate Editor, Plant Methods
CurrentProviding bioinformatics expertise to the Plant Methods Editorial Board.
Jan 2019 - Present
Acting Head Of Bioinformatics
Nov 2021 - Jul 2022
Deputy Head Of Bioinformatics
Feb 2021 - Nov 2021
Senior Bioinformatician
Bringing plant-focused bioinformatics, genome informatics, and training expertise to the offerings of the newly established South Australian Genomics Centre (SAGC).
Sep 2020 - Oct 2021
Founder
Undertaking consultancy and training activities in the area of genome informatics. My aim is to enable researchers to get their results faster and cheaper and organisation to improve the Resource Use Efficiency (RUE) of their scientific computing infrastructure.
May 2020 - Sep 2020
Senior Bioinformatician - Bioinformatics Hub
Enhancing the bioinformatics capability of the University of Adelaide through stronger research outcomes for all at the University. Focusing on research activities at the Waite campus.
Oct 2018 - Jun 2020
Scientific Committee For Genomics Data Repository
I sit on the scientific committee for a project funded through the University of Adelaide's Infrastructure Investment Plan (IIP). The project aims to develop a Genomics Data Repository capable of easing the management, analysis and sharing of data. While the focus is for enabling researchers within the Faculty of Health Sciences, the resource is being.
Nov 2017 - Jan 2019
Research Fellow In Bioinformatics
University Of Adelaide
Much of my work involves the analysis of genomic and transcriptomic data from polyploid wheat cultivars with the aim of improving agronomical traits. I am the sysadmin for a large memory Linux machine (64 cores and 512GBytes of RAM) as well as multiple Linux VMs used by the bioinformatics group. I have a passion for open, reusable code, version control and.
Nov 2012 - Oct 2018
Ngs Bioinformatics Trainer
Australian Bioinformatics Network
I was among the first cohort of Australian bioinformaticians to be funded to go to the European Bioinformatics Institute (EBI) to learn the skills required to become a hands-on bioinformatics trainer and to develop a Next Generation Sequencing hands-on workshop.During this time I have been instrumental in developing and deploying the NeCTAR Research Cloud.
Mar 2012 - Dec 2017
President
Bioinformatics Interest Group Of South Australia
In collaboration with colleagues, I have formed the Bioinformatics Interest Group of South Australia (BIG SA). BIG SA is a group of cross-organisational bioinformaticians and allied professions from around South Australia (SA).BIG SA aims to provide opportunities for the local research community to engage with its bioinformaticians, for bioinformaticians.
Oct 2011 - Dec 2017
Acpfg Student Management Committee
The Australian Centre For Plant Functional Genomics
The committee:1) Ensures students with the right academic background, skill set, aptitude and motivation are chosen2) Help provide advice about projects offered to students, to ensure projects are realistic and have suitable contingency plans and resources3) Help deal with issues that arise during a student’s project / candidature4) Provide support, advice.
Jan 2014 - Dec 2014
Senior Bioinformatician
Feb 2011 - Nov 2012
Oce Postdoc
May 2008 - Feb 2011
Postdoc
Feb 2005 - May 2008
R&D Assistant
I worked here during the school summer holidays for 2-3 years. I worked in both the R&D and QC labs performing product testing as well as assisting with process development.
Jul 1999 - Sep 2001
Assistant Research Scientist
Aug 1999 - Jul 2000
Team & coworkers
Colleagues at Alkahest, Inc.
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AT
Annette Tennstaedt
Colleague at Alkahest, Inc.San Francisco Bay Area, United States
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TN
Tibor Nanasi
Colleague at Alkahest, Inc.Budapest, Budapest, Hungary, Hungary
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CY
Cindy Yang
Colleague at Alkahest, Inc.San Francisco, California, United States, United States
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KA
Kamran Ahmed
Colleague at Alkahest, Inc.Karāchi, Sindh, Pakistan, Pakistan
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YW
Ying Wang
Colleague at Alkahest, Inc.Boston, Massachusetts, United States, United States
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KB
Kateryna Borodavchenko
Colleague at Alkahest, Inc.Saint Johns, Florida, United States, United States
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YL
Yue Long Guo
Colleague at Alkahest, Inc.Cary, North Carolina, United States, United States
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YL
Yesenia Lopez
Colleague at Alkahest, Inc.San Francisco Bay Area, United States
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RT
Rick Tearle
Colleague at Alkahest, Inc.Greater Adelaide Area, Australia
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RS
Rad Suchecki
Colleague at Alkahest, Inc.Adelaide, South Australia, Australia, Australia
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Annette Tennstaedt
Colleague at Alkahest, Inc.San Francisco Bay Area, United States
View →
TN
Tibor Nanasi
Colleague at Alkahest, Inc.Budapest, Budapest, Hungary, Hungary
View →
CY
Cindy Yang
Colleague at Alkahest, Inc.San Francisco, California, United States, United States
View →
KA
Kamran Ahmed
Colleague at Alkahest, Inc.Karāchi, Sindh, Pakistan, Pakistan
View →
YW
Ying Wang
Colleague at Alkahest, Inc.Boston, Massachusetts, United States, United States
View →
KB
Kateryna Borodavchenko
Colleague at Alkahest, Inc.Saint Johns, Florida, United States, United States
View →
YL
Yue Long Guo
Colleague at Alkahest, Inc.Cary, North Carolina, United States, United States
View →
YL
Yesenia Lopez
Colleague at Alkahest, Inc.San Francisco Bay Area, United States
View →
RT
Rick Tearle
Colleague at Alkahest, Inc.Greater Adelaide Area, Australia
View →
RS
Rad Suchecki
Colleague at Alkahest, Inc.Adelaide, South Australia, Australia, Australia
View →
2 education records
Nathan Watson-Haigh education
Phd, Bioinformatics
Master Of Pharmacology, Pharmacology
FAQ
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What company does Nathan Watson-Haigh work for?
Nathan Watson-Haigh works for Alkahest, Inc..
What is Nathan Watson-Haigh's role at Alkahest, Inc.?
Nathan Watson-Haigh is listed as Associate Director of Genome Informatics at Alkahest | Adelaide, Australia | Linux, Workflows & Reproducibility at Alkahest, Inc..
What is Nathan Watson-Haigh's email address?
AeroLeads has found 1 work email signal at @alkahest.com for Nathan Watson-Haigh at Alkahest, Inc..
Where is Nathan Watson-Haigh based?
Nathan Watson-Haigh is based in Greater Adelaide Area, Australia, Australia while working with Alkahest, Inc..
What companies has Nathan Watson-Haigh worked for?
Nathan Watson-Haigh has worked for Alkahest, Inc., Abacbs - Australian Bioinformatics And Computational Biology Society, Springer Nature, South Australian Genomics Centre (Sagc), and Genome Informatics & Bioinformatics Training.
Who are Nathan Watson-Haigh's colleagues at Alkahest, Inc.?
Nathan Watson-Haigh's colleagues at Alkahest, Inc. include Annette Tennstaedt, Tibor Nanasi, Cindy Yang, Kamran Ahmed, and Ying Wang.
How can I contact Nathan Watson-Haigh?
You can use AeroLeads to view verified contact signals for Nathan Watson-Haigh at Alkahest, Inc., including work email, phone, and LinkedIn data when available.
What schools did Nathan Watson-Haigh attend?
Nathan Watson-Haigh holds Phd, Bioinformatics from University Of York.
What skills is Nathan Watson-Haigh known for?
Nathan Watson-Haigh is listed with skills including Bioconductor, Genome Assembly, R, Git, Systems Biology, Snakemake, Linux, and Phylogenetics.
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