• 8 years of research experience in analytical chemistry, NGS, Bioinformatics, Biochemistry and Nanotechnology• Demonstrated the ability to design, conduct and evaluate research projects independently• Established effective communication skills interpersonally and professionally by internal and external collaborations.• Fluent in R, python, Linux, and NGS analyzing packages. Right now I am seeking for a full-time job related with NGS sequencing or biomedical informatics.
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Bioinformatics ScientistIllumina Nov 2018 - PresentSan Diego, Ca, Us -
Postdoctoral Research AssociateUniversity Of Utah May 2015 - Oct 2018Salt Lake City, Utah, UsSequence 8-oxo-dG by NGS and perform bioinformatics by R, python and Linux pipelines.Investigate the functions of promoter G-quadruplexes in vitro and in vivo (E.coli, HeLa and MEF cells) via luciferase reporter assays.• Python: Numpy, Scipy, Pandas, Re, Ipython, Matplotlib, Seaborn• R: Tidyr, ggplot2, stringr, readr, dplyr, reshape2, Bioconductor • LINUX: AWK, Sed, vi• Aligners: NovoAlign, Bowtie, Tophat2, cuffdiff2• Peakcaller and motif analysis: MACS2, MEME• DNA Sequencing: Bedtools, Samtools, LoFreq, GATK, Varscan2, Mutect, FreeBayes• Databases: Biomart, Ensembl, SRA, UCSC genome browser, GEO, TCGA -
Research AssistantUniversity Of Utah May 2010 - May 2015Salt Lake City, Utah, UsStudy DNA secondary structures such as DNA hairpins, and DNA modifications such as 5-methyl-C by protein nanopore (third generation DNA sequencing technique), HPLC, Uv/vis, CD, and MS. Internal hairpins and fishhook hairpins were found to have different unzipping mechanisms and locations. Explore the latch zone of alpha-hemolysin with a group fishhook hairpin structures. Besides abasic site, current differences between native base pairs were detected.Investigate the interactions of DNA hairpin with groove binders such as polyamines by protein nanopore. The binding of Spm and Spd were so strong that the hairpins will not unzip, while Put does not have an effect on the unzipping of hairpins.Demonstrated the kinetics of different length of CAG repeats are different even though they have similar thermodynamic stability. -
Graduate Teaching AssistantUniversity Of Utah Aug 2009 - May 2010Salt Lake City, Utah, UsTaught General Chemistry Lab -
InternKaifeng No.1 High School May 2008 - Sep 2008Taught General Chemistry for Grade 1 in NO.1 High School in Kaifeng, HenanDeveloped teaching materials Inspired students to find their own learning style
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InternChinese Academy Of Sciences Oct 2007 - May 2008Beijing, CnDesigned, synthesized, and characterized iron titanate catalysts for the selective catalytic reduction (SCR) of NO with NH3 by FT-IR, BET, XRD, and etc.Synthesized manganese-substitued iron titanate catalysts for the SCR of NO and NH3.Determined the NO conversion over different catalysts by FT-IR.Characterized the pore size, pore volume, pore diameter and structure of the catalysts by BET and XANES.Performed H2-TPR (temperature programmed reduction), NH3-TPD, AND NO-TPD (temperature programmed desorption)using quadrupole mass spectrometer. -
InternPeking University May 2007 - Sep 2007北京, Beijing, CnDeveloped methods to monitor volatile organic compounds (VOCs) in Children's exhalation by GC-MS in Prof. Zhao's groupSet up and troubleshoot instrumentAnalytical method development and transfer -
Undergraduate Research AssistantBeijing Normal University May 2006 - May 2007北京, Cn
Yun Ding Education Details
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University Of UtahBiomedical Informatics -
University Of UtahAnalytical Chemistry -
Beijing Normal UniversityChemistry
Frequently Asked Questions about Yun Ding
What company does Yun Ding work for?
Yun Ding works for Illumina
What is Yun Ding's role at the current company?
Yun Ding's current role is Bioinformatics Scientist at Illumina.
What schools did Yun Ding attend?
Yun Ding attended University Of Utah, University Of Utah, Beijing Normal University.
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