Yun Ding

Yun Ding Email and Phone Number

Bioinformatics Scientist at Illumina @ Illumina
Yun Ding's Location
Salt Lake City, Utah, United States, United States
About Yun Ding

• 8 years of research experience in analytical chemistry, NGS, Bioinformatics, Biochemistry and Nanotechnology• Demonstrated the ability to design, conduct and evaluate research projects independently• Established effective communication skills interpersonally and professionally by internal and external collaborations.• Fluent in R, python, Linux, and NGS analyzing packages. Right now I am seeking for a full-time job related with NGS sequencing or biomedical informatics.

Yun Ding's Current Company Details
Illumina

Illumina

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Bioinformatics Scientist at Illumina
Yun Ding Work Experience Details
  • Illumina
    Bioinformatics Scientist
    Illumina Nov 2018 - Present
    San Diego, Ca, Us
  • University Of Utah
    Postdoctoral Research Associate
    University Of Utah May 2015 - Oct 2018
    Salt Lake City, Utah, Us
    Sequence 8-oxo-dG by NGS and perform bioinformatics by R, python and Linux pipelines.Investigate the functions of promoter G-quadruplexes in vitro and in vivo (E.coli, HeLa and MEF cells) via luciferase reporter assays.• Python: Numpy, Scipy, Pandas, Re, Ipython, Matplotlib, Seaborn• R: Tidyr, ggplot2, stringr, readr, dplyr, reshape2, Bioconductor • LINUX: AWK, Sed, vi• Aligners: NovoAlign, Bowtie, Tophat2, cuffdiff2• Peakcaller and motif analysis: MACS2, MEME• DNA Sequencing: Bedtools, Samtools, LoFreq, GATK, Varscan2, Mutect, FreeBayes• Databases: Biomart, Ensembl, SRA, UCSC genome browser, GEO, TCGA
  • University Of Utah
    Research Assistant
    University Of Utah May 2010 - May 2015
    Salt Lake City, Utah, Us
    Study DNA secondary structures such as DNA hairpins, and DNA modifications such as 5-methyl-C by protein nanopore (third generation DNA sequencing technique), HPLC, Uv/vis, CD, and MS. Internal hairpins and fishhook hairpins were found to have different unzipping mechanisms and locations. Explore the latch zone of alpha-hemolysin with a group fishhook hairpin structures. Besides abasic site, current differences between native base pairs were detected.Investigate the interactions of DNA hairpin with groove binders such as polyamines by protein nanopore. The binding of Spm and Spd were so strong that the hairpins will not unzip, while Put does not have an effect on the unzipping of hairpins.Demonstrated the kinetics of different length of CAG repeats are different even though they have similar thermodynamic stability.
  • University Of Utah
    Graduate Teaching Assistant
    University Of Utah Aug 2009 - May 2010
    Salt Lake City, Utah, Us
    Taught General Chemistry Lab
  • Kaifeng No.1 High School
    Intern
    Kaifeng No.1 High School May 2008 - Sep 2008
    Taught General Chemistry for Grade 1 in NO.1 High School in Kaifeng, HenanDeveloped teaching materials Inspired students to find their own learning style
  • Chinese Academy Of Sciences
    Intern
    Chinese Academy Of Sciences Oct 2007 - May 2008
    Beijing, Cn
    Designed, synthesized, and characterized iron titanate catalysts for the selective catalytic reduction (SCR) of NO with NH3 by FT-IR, BET, XRD, and etc.Synthesized manganese-substitued iron titanate catalysts for the SCR of NO and NH3.Determined the NO conversion over different catalysts by FT-IR.Characterized the pore size, pore volume, pore diameter and structure of the catalysts by BET and XANES.Performed H2-TPR (temperature programmed reduction), NH3-TPD, AND NO-TPD (temperature programmed desorption)using quadrupole mass spectrometer.
  • Peking University
    Intern
    Peking University May 2007 - Sep 2007
    北京, Beijing, Cn
    Developed methods to monitor volatile organic compounds (VOCs) in Children's exhalation by GC-MS in Prof. Zhao's groupSet up and troubleshoot instrumentAnalytical method development and transfer
  • Beijing Normal University
    Undergraduate Research Assistant
    Beijing Normal University May 2006 - May 2007
    北京, Cn

Yun Ding Education Details

  • University Of Utah
    University Of Utah
    Biomedical Informatics
  • University Of Utah
    University Of Utah
    Analytical Chemistry
  • Beijing Normal University
    Beijing Normal University
    Chemistry

Frequently Asked Questions about Yun Ding

What company does Yun Ding work for?

Yun Ding works for Illumina

What is Yun Ding's role at the current company?

Yun Ding's current role is Bioinformatics Scientist at Illumina.

What schools did Yun Ding attend?

Yun Ding attended University Of Utah, University Of Utah, Beijing Normal University.

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