Zhenfeng Liu, Ph.D.

Zhenfeng Liu, Ph.D. Email and Phone Number

Bioinformatics Scientist and Bioinformatics Group Leader @ Zymo Research Corp
Irvine, CA, US
Zhenfeng Liu, Ph.D.'s Location
Irvine, California, United States, United States
Zhenfeng Liu, Ph.D.'s Contact Details

Zhenfeng Liu, Ph.D. personal email

Zhenfeng Liu, Ph.D. phone numbers

About Zhenfeng Liu, Ph.D.

I am a bioinformatics data scientist with >10 years of experience in research and industry setting. I have extensive experience in bioinformatics data analysis, complex pipeline building, but also experience in machine learning.I currently work at Zymo Research as a bioinformatics group leader. During the years at Zymo, I developed bioinformatics pipelines for multiple library types including RNAseq, ChIPseq, 16S amplicon-seq and shotgun metagenome sequencing. I lead a team to develop no-code bioinformatics platform (https://www.aladdin101.org) that runs bioinformatics pipelines for customers. I also was responsible for various software, data analysis, modeling, database building efforts at the company. I previously worked as computer scientist at USC studying algal biology. I developed computational methods and pipelines for analyzing algal gene expression data, set up and maintained a lab bioinformatic server and taught multiple students bioinformatics.I've also done several machine learning projects with real-life data. Please check them out at my GitHub page. (https://github.com/zxl124)I've published >30 papers, please find details at my Google Scholar page. (https://scholar.google.com/citations?user=cpez2vgAAAAJ&hl=en)Please send me a message if you want to talk bioinformatics or data science!

Zhenfeng Liu, Ph.D.'s Current Company Details
Zymo Research Corp

Zymo Research Corp

View
Bioinformatics Scientist and Bioinformatics Group Leader
Irvine, CA, US
Website:
zymoresearch.com
Employees:
232
Zhenfeng Liu, Ph.D. Work Experience Details
  • Zymo Research Corp
    Bioinformatics Scientist And Bioinformatics Group Leader
    Zymo Research Corp
    Irvine, Ca, Us
  • Zymo Research Corp
    Bioinformatics Scientist & Bioinformatics Group Leader
    Zymo Research Corp Feb 2019 - Present
    Irvine, California, Us
    • Developed RNAseq, ChIPseq, miRNAseq, microbiomics, and many other bioinformatic pipelines that are used in production at scale and produce interactive reports.• Designed and led a team to develop a no-code bioinformatics platform that runs pipelines for customers.• Performed bioinformatics and statistical analysis on numerous customer projects.• Co-led the effort to build a bioinformatics team oversees to help operation and R&D.• Directed the project to consolidate and clean internal and public methylation array and targeted methyl-seq data to build databases.
  • University Of Southern California
    Computational Scientist
    University Of Southern California Sep 2012 - Oct 2018
    Los Angeles, Ca, Us
    • Developed computational pipelines to generate statistical results from >10TB of RNA-Seq and amplicon-seq data.• Created data visualizations and written publications for >10 projects.• Designed experiments, computer simulations, and models to estimate number of RNA molecules in cells.• Created and improved a RNA/protein database for algae with network analysis.• Built and administered Linux servers and provided computational training to a team of15.
  • Penn State University
    Graduate Research Assistant
    Penn State University Aug 2005 - Sep 2012
    University Park, Pa, Us
    • Generated and assembled genomes of ~30 bacteria.• Discovered and validated 2 important genes through comparative genomics.• Among the first to apply NGS to metatranscriptome studies.• Redefined a group of bacteria through analyses of their genomes and transcriptomes.

Zhenfeng Liu, Ph.D. Skills

Molecular Biology Bioinformatics Biochemistry Genome Sequencing Genomics Microbial Ecology Microbiology Transcriptomics Python Hplc Perl Ngs Machine Learning R Rna Seq Dna Sequencing Data Visualization Data Mining Pandas Jupyter Predictive Modeling Scikit Learn Sql Data Analysis Research Statistics Life Sciences Microsoft Word Microsoft Powerpoint Microsoft Excel Sequence Analysis Rnaseq

Zhenfeng Liu, Ph.D. Education Details

  • Penn State University
    Penn State University
    And Molecular Biology
  • Springboard
    Springboard
    Data Science Career Track
  • Peking University
    Peking University
    Biological Sciences

Frequently Asked Questions about Zhenfeng Liu, Ph.D.

What company does Zhenfeng Liu, Ph.D. work for?

Zhenfeng Liu, Ph.D. works for Zymo Research Corp

What is Zhenfeng Liu, Ph.D.'s role at the current company?

Zhenfeng Liu, Ph.D.'s current role is Bioinformatics Scientist and Bioinformatics Group Leader.

What is Zhenfeng Liu, Ph.D.'s email address?

Zhenfeng Liu, Ph.D.'s email address is zh****@****ail.com

What is Zhenfeng Liu, Ph.D.'s direct phone number?

Zhenfeng Liu, Ph.D.'s direct phone number is +181487*****

What schools did Zhenfeng Liu, Ph.D. attend?

Zhenfeng Liu, Ph.D. attended Penn State University, Springboard, Peking University.

What are some of Zhenfeng Liu, Ph.D.'s interests?

Zhenfeng Liu, Ph.D. has interest in Science And Technology.

What skills is Zhenfeng Liu, Ph.D. known for?

Zhenfeng Liu, Ph.D. has skills like Molecular Biology, Bioinformatics, Biochemistry, Genome Sequencing, Genomics, Microbial Ecology, Microbiology, Transcriptomics, Python, Hplc, Perl, Ngs.

Who are Zhenfeng Liu, Ph.D.'s colleagues?

Zhenfeng Liu, Ph.D.'s colleagues are Charles L., Paolo Piatti, Katie Yee, Julia Goldstein, Akash Goindi, Korinna Hudspeth, Ty Tran.

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