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Predicting input signals of transcription factors in Escherichia coli EMBO Press

Subunit specialization in AAA+ proteins and substrate unfolding during transcription complex remodeling PNAS

A foundation model of transcription across human cell types Nature

An mRNA-encoded dominant-negative inhibitor of transcription factor RUNX1 suppresses vitreoretinal disease in experimental models Science | AAAS

Selective phase separation of transcription factors is driven by orthogonal molecular grammar Nature

Specifying Challenges in Transcribing Covert Recordings: Implications for Forensic Transcription Frontiers

Genome-wide single-cell and single-molecule footprinting of transcription factors with deaminase PNAS

Multiple direct and indirect roles of the Paf1 complex in transcription elongation, splicing, and histone modifications ScienceDirect.com

Sequence basis of transcription initiation in the human genome Science | AAAS

Gene Architecture Facilitates Intron-Mediated Enhancement of Transcription Frontiers

Sites of transcription initiation drive mRNA isoform selection ScienceDirect.com

Structural visualization of transcription initiation in action Science | AAAS

The spatial biology of transcription and translation in rapidly growing Escherichia coli Frontiers

A genomewide oscillation in transcription gates DNA replication and cell cycle PNAS

Patterns of transcription factor programs and immune pathway activation define four major subtypes of SCLC with distinct therapeutic vulnerabilities ScienceDirect.com

Global Analysis of Transcription Start Sites in the New Ovine Reference Genome ( Oar rambouillet v1.0 Frontiers

Specificity and robustness in transcription control networks PNAS

Chromatin expansion microscopy reveals nanoscale organization of transcription and chromatin Science | AAAS

The Role and Regulatory Mechanism of Transcription Factor EB in Health and Diseases Frontiers

Protein arginine methylation in transcription and epigenetic regulation Frontiers

Structural basis for RNA polymerase II ubiquitylation and inactivation in transcription-coupled repair Nature

Mechanistic insights in transcription-coupled nucleotide excision repair of ribosomal DNA PNAS

Structural basis of transcription-translation coupling and collision in bacteria Science | AAAS

Small molecule targeting of transcription-replication conflict for selective chemotherapy ScienceDirect.com

Elf1 promotes Rad26’s interaction with lesion-arrested Pol II for transcription-coupled repair PNAS

Ssu72: a versatile protein with functions in transcription and beyond Frontiers

Abduction and asylum in the lives of transcription factors PNAS

Dynamic conformational switching underlies TFIIH function in transcription and DNA repair and impacts genetic diseases Nature

Resolving the 3D Landscape of Transcription-Linked Mammalian Chromatin Folding ScienceDirect.com

TFIIH action in transcription initiation and promoter escape requires distinct regions of downstream promoter DNA PNAS

High-Resolution Mapping of Transcription Initiation in the Asexual Stages of Toxoplasma gondii Frontiers

Role of Transcription Factors in Peripheral Nerve Regeneration Frontiers

Structural basis of transcription: RNA polymerase II substrate binding and metal coordination using a free-electron laser PNAS

Mycobacterial HelD connects RNA polymerase recycling with transcription initiation Nature

Conserved rates and patterns of transcription errors across bacterial growth states and lifestyles PNAS

Acute depletion of human core nucleoporin reveals direct roles in transcription control but dispensability for 3D genome organization ScienceDirect.com

MiT/TFE Family of Transcription Factors: An Evolutionary Perspective Frontiers

Precise modulation of transcription factor levels identifies features underlying dosage sensitivity Nature

Live imaging of transcription sites using an elongating RNA polymerase II–specific probe | Journal of Cell Biology Rockefeller University Press

Pervasive Chromatin-RNA Binding Protein Interactions Enable RNA-Based Regulation of Transcription ScienceDirect.com

Drugging Fuzzy Complexes in Transcription Frontiers

Physical constraints and functional characteristics of transcription factor–DNA interaction PNAS

Histone methylation: at the crossroad between circadian rhythms in transcription and metabolism Frontiers

Persistence of RNA transcription during DNA replication delays duplication of transcription start sites until G2/M ScienceDirect.com

Coupling of Transcription and Translation in Archaea: Cues From the Bacterial World Frontiers

Nonlinear control of transcription through enhancer–promoter interactions Nature

Dynamics of transcription-coupled repair of cyclobutane pyrimidine dimers and (6-4) photoproducts in Escherichia coli PNAS

Differential contribution of transcription factors to Arabidopsis thaliana defense against Spodoptera littoralis Frontiers

The Relevance of Transcription Factors in Gastric and Colorectal Cancer Stem Cells Identification and Eradication Frontiers

Complexity in Transcription Control at the Activation Domain–Mediator Interface Science | AAAS

Observation by fluorescence microscopy of transcription on single combed DNA PNAS

The SIX Family of Transcription Factors: Common Themes Integrating Developmental and Cancer Biology Frontiers

Polarity of the CRISPR roadblock to transcription Nature

Structural basis of nucleosome retention during transcription elongation Science | AAAS

DNA methylation patterns of transcription factor binding regions characterize their functional and evolutionary contexts Genome Biology

DNA lesion bypass and the stochastic dynamics of transcription-coupled repair PNAS

R-loop proximity proteomics identifies a role of DDX41 in transcription-associated genomic instability Nature

Role of transcription factors in apoptotic cells clearance Frontiers

Mechanistic duality of transcription factor function in phytochrome signaling PNAS

CopR, a Global Regulator of Transcription to Maintain Copper Homeostasis in Pyrococcus furiosus Frontiers

Structures of transcription preinitiation complex engaged with the +1 nucleosome Nature

Thermofluidic heat exchangers for actuation of transcription in artificial tissues Science | AAAS

Folding of a large ribozyme during transcription and the effect of the elongation factor NusA PNAS

Therapeutic Targeting of Transcription Factors to Control the Cytokine Release Syndrome in COVID-19 Frontiers

The Role of Charge Density Coupled DNA Bending in Transcription Factor Sequence Binding Specificity: A Generic Mechanism for Indirect Readout ACS Publications

Disruption of neural signal transducer and activator of transcription 3 causes obesity, diabetes, infertility, and thermal dysregulation PNAS

Direct visualization of transcription-replication conflicts reveals post-replicative DNA:RNA hybrids Nature

Preferences in a trait decision determined by transcription factor variants PNAS

Congruence of Transcription Programs in Adult Stem Cell-Derived Jejunum Organoids and Original Tissue During Long-Term Culture Frontiers

HDAC Inhibitor Titration of Transcription and Axolotl Tail Regeneration Frontiers

Structural basis of transcription: α-Amanitin–RNA polymerase II cocrystal at 2.8 Å resolution PNAS

Hi-TrAC reveals division of labor of transcription factors in organizing chromatin loops Nature

An Automated Cell-Free Workflow for Transcription Factor Engineering ACS Publications

Tunable genetic devices through simultaneous control of transcription and translation Nature

Signal Transducer and Activator of Transcription 3 Hyperactivation Associates With Follicular Helper T Cell Differentiation and Disease Activity in Rheumatoid Arthritis Frontiers

Evidence that direct inhibition of transcription factor binding is the prevailing mode of gene and repeat repression by DNA methylation Nature

FACT maintains nucleosomes during transcription and stem cell viability in adult mice EMBO Press

Local rewiring of genome–nuclear lamina interactions by transcription | The EMBO Journal EMBO Press

Knockdown of Genes Involved in Transcription and Splicing Reveals Novel RNAi Targets for Pest Control Frontiers

Protein complex stoichiometry and expression dynamics of transcription factors modulate stem cell division PNAS

Structural basis of transcription-translation coupling Science | AAAS

Reconstruction of Transcription Control Networks in Mollicutes by High-Throughput Identification of Promoters Frontiers

Deficiency of Transcription Factor Sp1 Contributes to Hypertrophic Cardiomyopathy | Circulation Research American Heart Association Journals

Expression Regulation and Physiological Role of Transcription Factor FOXO3a During Ovarian Follicular Development Frontiers

Drosophila Exhibit Divergent Sex-Based Responses in Transcription and Motor Function After Traumatic Brain Injury Frontiers

Landscape of transcription in human cells Nature

Regulation of RNA Polymerase II Transcription Initiation and Elongation by Transcription Factor TFII-I Frontiers

Evaluation and Comparison of the Efficiency of Transcription Terminators in Different Cyanobacterial Species Frontiers

Stochastic particle unbinding modulates growth dynamics and size of transcription factor condensates in living cells PNAS

Gene Expression Profiling of Transcription Factors of Helicobacter pylori under Different Environmental Conditions Frontiers

Engineering Prokaryotic Transcriptional Activator XylR as a Xylose-Inducible Biosensor for Transcription Activation in Yeast ACS Publications

Single-molecule imaging of transcription at damaged chromatin Science | AAAS

Engineering Material Properties of Transcription Factor Condensates to Control Gene Expression in Mammalian Cells and Mice Wiley Online Library

Intrinsic Disorder in Transcription Factors | Biochemistry ACS Publications

Parkinson’s Disease: Overview of Transcription Factor Regulation, Genetics, and Cellular and Animal Models Frontiers

Glucocorticoid receptor action in prostate cancer: the role of transcription factor crosstalk Frontiers

Commentary: The landscape of transcription errors in eukaryotic cells Frontiers

Identification of transcription factor binding sites using ATAC-seq Genome Biology

Peptidyl‐prolyl isomerases: a new twist to transcription EMBO Press

Inference of transcription factor binding from cell-free DNA enables tumor subtype prediction and early detection Nature