Alexander Frese, Phd Email & Phone Number

• Generated deep, quantitative transcriptome (>13k transcripts) and TMT-based multiplexed proteome (>7k proteins) during key stages of Ciona embryogenesis.• Integrated Ciona multi-omics data and identified novel trends in the dataset with python-based machine learning, visualizing the data in matplotlib and R.• Assembled in-house ribosomal profiling protocol and created a Linux-based bioinformatic pipeline to process and analyze translational efficiency data in mouse cells.• Mentored a Princeton undergraduate, guiding her to independence in her thesis research.

• Developed strong communication, mentoring, and organization skills through assisting in the instruction of graduate-level bioinformatics and undergraduate-level molecular biology.

• Led team in optimizing a launch strategy for client’s product using published data.• Organized machine learning-based go-to-market strategy for post-clinical trials.

• Quantified carbon emissions from permafrost peat soil samples via GC-FID.• Generated and analyzed RNA-seq data on each soil sample.• Built QIIME-based bioinformatic pipeline to integrate emission data with microbial source.

• Developed strong communication skills via assisting in the instruction of undergraduate-level calculus and statistics.

Greater Boston Area

• Established mechanism by which Hsf1 is activated during oxidative stress in yeast.• Investigated orthogonal stress-induced transcriptional activations by Hsf1 in yeast with DEseq2 in R.• Mentored a high school student and helped him complete his first experiments.

• Used blast-based bioinformatics to identify putative ion channels in lobster.• Calculated ion channel mRNA abundance via RT-PCR in lobster cardiac ganglion.• Constructed a cloud-based blast pipeline to annotate putative neurotransmitter receptors in lamprey based on the known neurotransmitter receptors in mouse.

Doctor Of Philosophy - Phd, Molecular Biology

Activities and Societies: • Case Competition Chair in Princeton University Graduate Consulting Club (2022-2023) • Co-Founder and Vice.

B.S. Microbiology, B.S. Computational Mathematics

Activities and Societies: • National Hispanic Scholar • Sigma Alpha Lambda National Leadership and Honors Organization • Alpha Lambda.

Education record