Senior Bioinformatics Scientist
CurrentR&D, variant/biomarker discovery and detection, algorithm development, software development
Feb 2023 - Present
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Daniel Cuevas Email & Phone Number
Senior Bioinformatics Scientist
at
Exact Sciences
1 work email found
@sdsu.edu
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✓ Verified May 2026
4 data sources
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Current company
Role
Senior Bioinformatics Scientist
Location
San Diego, California, United States
Company size
Who is Daniel Cuevas? Overview
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Quick answer
Daniel Cuevas is listed as Senior Bioinformatics Scientist at Exact Sciences, a company with 501 employees, based in San Diego, California, United States. AeroLeads shows a work email signal at sdsu.edu and a matched LinkedIn profile for Daniel Cuevas.
Daniel Cuevas previously worked as Bioinformatics Scientist II at Exact Sciences and Bioinformatics Scientist II at Progenity, Inc.. Daniel Cuevas holds Doctor Of Philosophy - Phd, Bioinformatics And Computational Biology from San Diego State University.
Company email context
Email format at Exact Sciences
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{first}.{last}@sdsu.edu
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Profile bio
About Daniel Cuevas
My recent experience has been focused on all stages of the product development life cycle: from early conception and biomarker identification to algorithm development and clinical validation. I excel in small and large collaborative R&D teams of molecular biologists, software engineers, and statisticians. My roles often involve model development, data analysis, data management, pipeline development, and software management. Software development experience ranges from quick prototyping to late-stage software design and testing following ISO standards and compliance. My passion for discovery lives alongside enabling my teams to analyze and understand their own data. Creating low barrier tools with high data accessibility expands engagement, increases development, and enhances cooperation for all team members.== Relevant Skills ==• Proficient languages: Python, R, Perl, bash, PHP, SQL• Intermediate languages: Java, C++, MATLAB• Sequencing: QC, alignment, bisulfite sequencing• Microbiome: 16S, metagenomics, annotation• Automated analysis pipeline reports• Multivariate statistical analysis, regression, classification• Model parameter optimization, data exploration• Supervised/unsupervised machine learning techniques• Cluster computing, AWS• Prototyping and ad-hoc analysis
Listed skills include Bioinformatics, Perl, Python, R, and 42 others.
Current workplace
Daniel Cuevas's current company
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Exact Sciences
8 roles
Daniel Cuevas work experience
A career timeline built from the work history available for this profile.
Bioinformatics Scientist Ii
Apr 2022 - Feb 2023
Bioinformatics Scientist Ii
Progenity, Inc.
R&D, biomarker discovery, product innovation, concept to commercial product development, algorithm & analysis pipeline development. Below are the mix of skills, tools, and activities I exercised:**Early product development**- Disease biomarker discovery- Proof-of-concept predictive modeling- Data characterization- R&D-centric software development.
Jan 2020 - Mar 2022
Bioinformatics Scientist I
Progenity, Inc.
Mar 2018 - Jan 2020
Graduate Student Research Assistant
Generated a diverse set of bacterial genome-scale metabolic models to perform comparative analyses alongside investigation into common and unique difficulties in metabolism-based annotationsDeveloped automated pipeline named PMAnalyzer that performs logistic model fitting onto bacterial growth curves using Python’s SciPy optimization libraries and Pandas.
Jul 2012 - Mar 2018
Bioinformatics Scientist
Developed a web-interface serving as a hub that aggregated the entirety of experimental results and analysis conducted by all Ion Torrent R&D sites across the country and was absorbed as an integral tool for comparative studies throughout the companyPerformed deep analysis on sequence quality and mapping statistics (e.g., GC bias, primer-strand.
Sep 2011 - Jul 2012
Intern - Bioinformatics And Molecular Biology Scientist
Performed multiple studies to measure the quality of several sequencing experiments by focusing on the performance of various sequencing polymerase mutantsLed projects through supervision of sequencing and mapping runs to produce variant calls, mapping statistics, and mapping quality summaries for Collaborations groupAssisted team members with sequencing.
May 2011 - Aug 2011
Undergraduate Researcher
Constructed a search hash-algorithm used to accurately identify DNA sequence similarity among multiple filesCollaborated with a group member in developing an Android mobile application that effectively extracted metagenomic information from a DNA sequence fileDeveloped a social network web application to access and distribute metagenomic data while.
May 2009 - May 2011
Team & coworkers
Colleagues at Exact Sciences
Other employees you can reach at exactsciences.com. View company contacts for 501 employees →
MM
Matt Madden
Colleague at Exact Sciences
Madison, Wisconsin, United States, United States
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KJ
Kate Johnson, Pmp
Colleague at Exact Sciences
Madison, Wisconsin, United States, United States
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LM
Laura Mccleese
Colleague at Exact Sciences
Stafford, Virginia, United States, United States
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KM
Kari Mcchesney
Colleague at Exact Sciences
Greater Madison Area, United States
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HF
Harrison Fleming
Colleague at Exact Sciences
Madison, Wisconsin, United States, United States
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SF
Sue Ferguson
Colleague at Exact Sciences
Madison, Wisconsin, United States, United States
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SH
Samantha Heimark
Colleague at Exact Sciences
Janesville, Wisconsin, United States, United States
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BC
Brian Cech
Colleague at Exact Sciences
Madison, Wisconsin, United States, United States
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LM
Leighann Madden
Colleague at Exact Sciences
Knoxville, Tennessee, United States, United States
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EK
Elena Kim
Colleague at Exact Sciences
San Diego, California, United States, United States
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Matt Madden
Colleague at Exact Sciences
Madison, Wisconsin, United States, United States
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KJ
Kate Johnson, Pmp
Colleague at Exact Sciences
Madison, Wisconsin, United States, United States
View →
LM
Laura Mccleese
Colleague at Exact Sciences
Stafford, Virginia, United States, United States
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KM
Kari Mcchesney
Colleague at Exact Sciences
Greater Madison Area, United States
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HF
Harrison Fleming
Colleague at Exact Sciences
Madison, Wisconsin, United States, United States
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SF
Sue Ferguson
Colleague at Exact Sciences
Madison, Wisconsin, United States, United States
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SH
Samantha Heimark
Colleague at Exact Sciences
Janesville, Wisconsin, United States, United States
View →
BC
Brian Cech
Colleague at Exact Sciences
Madison, Wisconsin, United States, United States
View →
LM
Leighann Madden
Colleague at Exact Sciences
Knoxville, Tennessee, United States, United States
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EK
Elena Kim
Colleague at Exact Sciences
San Diego, California, United States, United States
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3 education records
Daniel Cuevas education
Doctor Of Philosophy - Phd, Bioinformatics And Computational Biology
San Diego State University
Doctor Of Philosophy - Phd, Bioinformatics And Computational Biology
Claremont Graduate University
Bachelor Of Science - Bs, Computer Science
San Diego State University
FAQ
Frequently asked questions about Daniel Cuevas
Quick answers generated from the profile data available on this page.
What company does Daniel Cuevas work for?
Daniel Cuevas works for Exact Sciences.
What is Daniel Cuevas's role at Exact Sciences?
Daniel Cuevas is listed as Senior Bioinformatics Scientist at Exact Sciences.
What is Daniel Cuevas's email address?
AeroLeads has found 1 work email signal at @sdsu.edu for Daniel Cuevas at Exact Sciences.
Where is Daniel Cuevas based?
Daniel Cuevas is based in San Diego, California, United States while working with Exact Sciences.
What companies has Daniel Cuevas worked for?
Daniel Cuevas has worked for Exact Sciences, Progenity, Inc., San Diego State University, and Ion Torrent At Life Technologies.
Who are Daniel Cuevas's colleagues at Exact Sciences?
Daniel Cuevas's colleagues at Exact Sciences include Matt Madden, Kate Johnson, Pmp, Laura Mccleese, Kari Mcchesney, and Harrison Fleming.
How can I contact Daniel Cuevas?
You can use AeroLeads to view verified contact signals for Daniel Cuevas at Exact Sciences, including work email, phone, and LinkedIn data when available.
What schools did Daniel Cuevas attend?
Daniel Cuevas holds Doctor Of Philosophy - Phd, Bioinformatics And Computational Biology from San Diego State University.
What skills is Daniel Cuevas known for?
Daniel Cuevas is listed with skills including Bioinformatics, Perl, Python, R, Molecular Biology, Matlab, Computational Biology, and Linux.
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