After my studies in Biomedical Engineering (BSc & MSc at the Politecnico di Milano, Italy), I received my Ph.D. in Bioinformatics in 2017 from the University Medical Center Mainz, in Germany, under the supervision of Prof. Harald Binder.Being awarded a Virchow Felloship from the Center for Thrombosis and Hemostasis, I was a Postdoctoral Fellow under the joint supervision of Prof. Wolfram Ruf and Prof. Miguel Andrade, and I grew fond of platelets and their transcriptome.My research interests involve the development of methods and software for interactive and reproducible research, bringing together the fields of bioinformatics, statistics, genomics, and biology. Sitting at the interface of many disciplines, with a focus on Immunology and cancer research (e.g. within the SFB1292), I like to contribute with tools that deliver comprehensive and comprehensible omics data analysis. This encompasses data visualization and exploration, advanced statistical modeling, and interpretation and contextualization, most often realized with the R programming language.Since September 2021 I am the Head of the Bioinformatics Group at the Institute of Medical Biostatistics, Epidemiology and Informatics (University Medical Center Mainz).I also serve as the Joint Head of the Core Facility Bioinformatics - BIUM(MZ), supporting biomedical reasearch with molecular data and providing an interface for bioinformatics expertise.In the time when I am not sitting behind a computer screen, you can mostly find me with my three kids, listening to music, cooking, or in a combination of the items above.
Institute Of Medical Biostatistics, Epidemiology And Informatics, University Med
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Head Of The Bioinformatics GroupInstitute Of Medical Biostatistics, Epidemiology And Informatics, University MedMainz, Rp, De
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Head Of The Bioinformatics GroupInstitute Of Medical Biostatistics, Epidemiology And Informatics, University Medical Center Mainz Sep 2021 - PresentMainz, Rhineland-Palatinate, GermanyTranscriptome analysis, single cell data analysis and integration; development of bioinformatics methods, software, and resources; data visualization and integration, development of platforms for interactive and reproducible data analysis; functional analysis incorporating network-based knowledge.
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Deputy Head Of The Genomic Statistics And Bioinformatics DivisionInstitute Of Medical Biostatistics, Epidemiology And Informatics (Imbei) Sep 2020 - Aug 2021Mainz, Rhineland-Palatinate, Germany
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Postdoctoral FellowImbei/Center For Thrombosis And Hemostasis (Cth) Mainz Jan 2018 - Sep 2020Mainz, Rhineland-Palatinate, GermanyVirchow fellow, trying to understand platelets and their transcriptomes.My research interests involve the development of methods and software for interactive and reproducible research, bringing together the fields of bioinformatics, statistics, genomics, and biology.I love working in the R programming language, and with software from the Bioconductor project, where I also contributed some packages.
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Phd Student - Research FellowInstitute Of Medical Biostatistics, Epidemiology And Informatics - Imbei Mainz Aug 2013 - Dec 2017Mainz Area, GermanyDepartment of Medical Biostatistics- Development of in vivo cell tracking algorithms- Analysis of Next-Generation Sequencing data (RNA-seq, ChIP-seq)- Statistical counseling
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Phd StudentInstitute Of Molecular Biology, Mainz Jan 2012 - Jul 2013Mainz, Rhineland-Palatinate, GermanySignaling to Chromatin - Epigenomics of Stem Cell DifferentiationChIP-seq, RNA-seq, stem cell biology, epigenetics and molecular biology tools
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Research Fellow - BioinformaticianIrccs Eugenio Medea Jan 2011 - Dec 2011Mailand Und Umgebung, ItalienData mining, population genetics analysisDevelopment of tools to analyze genomic variabilityGeCo++, development of dedicated open source library for Genomic Computation
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Research Fellow - Biomedical EngineerIrccs Eugenio Medea Jun 2009 - Dec 2010Mailand Und Umgebung, ItalienECG Signal analysis, Movement analysis investigating ataxia and autism in childrenDevelopment of research experimental protocols and data elaboration
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Technical ConsultantUniversità Degli Studi Di Milano-Bicocca Oct 2010 - Jun 2011Mailand Und Umgebung, ItalienTechnical consultancy for the Department of PsychologyElectromiography in newborns and in early childhood, protocol development, data acquisition and analysis -
Research AssistantKarlsruhe Institute Of Technology (Kit) / University Of Karlsruhe (Th) Nov 2007 - Sep 2008Karlsruhe Und Umgebung, DeutschlandImplementation of camera vision algorithms for the calculation of the accuracy of an optoelectronic movement analysis system (ART Tracking) -
InternIrccs Istituto Ortopedico Galeazzi Jul 2005 - Aug 2005Mailand Und Umgebung, ItalienWarehouse management and analysis of the logistics, focus on the traceability of the products
Federico Marini Skills
Federico Marini Education Details
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Institute Of Medical Biostatistics, Epidemiology And Informatics (Imbei), University Medical Center MainzBioinformatics -
110/110 -
105/110
Frequently Asked Questions about Federico Marini
What company does Federico Marini work for?
Federico Marini works for Institute Of Medical Biostatistics, Epidemiology And Informatics, University Med
What is Federico Marini's role at the current company?
Federico Marini's current role is Head of the Bioinformatics Group.
What schools did Federico Marini attend?
Federico Marini attended Institute Of Medical Biostatistics, Epidemiology And Informatics (Imbei), University Medical Center Mainz, Universität Karlsruhe (Th), Politecnico Di Milano, Politecnico Di Milano.
What skills is Federico Marini known for?
Federico Marini has skills like Bioinformatics, Next Generation Sequencing, Epigenetics, Chip Seq, Rnaseq, R, Bioconductor, C++, Shell Scripting, Matlab, Relational Databases, Latex.
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Federico Marini
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