Ivan Semenov Email & Phone Number

Vancouver, British Columbia, Canada

PhD in Bioinformatics in Dr. Artem Cherkasov's lab

Hong Kong, Hong Kong Sar

Insilico Medicine is a clinical-stage end-to-end generative artificial intelligence (AI) pharmaceutical company that focuses on accelerating drug discovery and development.Research Project:"Quantum-assisted fragment-based automated structure generator"Developed a fully automated algorithm designed to construct ligands for a target protein using a library of molecular fragments. New low-micromolar inhibitors of CAMKK2 and ATM were designed using the algorithm.

Yerevan, Armenia

BostonGene is an IT-healthcare company which develops a software platform to empower personalized treatment and the delivery of optimized therapeutics for patients with oncological and immunological disorders.Research Project:"Pathogen-specific T and B cell receptors: designing a search algorithm based on RNA-seq data"➢ Participated in research projects within oncoimmunology➢ Analyzed T and B cell receptor repertoires (MiXCR, TRUST4)➢ Developed a new TCR/BCR clustering algorithm➢ Wrote bioinformatics workflows for NGS pre-processing and data analysis ➢ Supported pipelines in a product environment

Moscow, Russia

Warsaw, Mazowieckie, Poland

ImmunoMind is a UC Berkeley SkyDeck alumnus company focused on the immune cell biology and discovery of new T-cell therapies.Research Project:«Developing best practices for semi-automatic single-cell data annotation»➢ Collected high-quality single-cell datasets and conducted the following pre-processing➢ Trained and compared ML models for cell type classification: SVM, XGBoost, Random Forest➢ Created benchmark of single-cell data annotation instruments

St Petersburg City, Russia

BIOCAD is a leading Russian pharmaceutical company(№2 in the list of “20 the best pharmaceutical companies in Russia”, Forbes) ➢ Participated in the design of NLRP3 inhibitors➢ Performed docking, pharmacophore modeling and visualization in Schrödinger➢ Conducted virtual screening of chemical compounds in ChEMBL, PubChem, Reaxys➢ Worked with molecules using RDKit and BioPandas libraries in Python

Doctor Of Philosophy - Phd, Bioinformatics

Specialist, Chemistry Department, Bioorganic Chemistry, Cum Laude

360 ECTS in bioorganic chemistry Final qualifying paper: "Pathogen-specific T and B cell receptors: designing a search algorithm based.

Retraining Program, Bioinformatics For Biologists, 4.9 (Max 5.0)

520 academic hours from September 11, 2021 to June 10, 2022 Courses passed: Python, R and statistics, Linux, machine learning, discrete.