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Experienced data scientist, advanced quantitative microscopist, and biophysicist with a strong, broad background in life sciences data. I specialize in applying advanced analytical, machine, and deep learning techniques to complex biological data, with a proven track record in developing novel approaches for life sciences and imaging data. I thrive in complex, open-ended problems, with a strong interest in the overlap and application of geometric and topological theory in AI, quantum machine learning and computing, together with physics-informed neural networks.My expertise spans a wide range of technical skills and areas, including data science & analytics, mathematical concepts, machine learning & AI, and various toolsets. I'm proficient in time series analyses, statistical analyses, feature engineering, anomaly detection, data & metadata ETL, databases, dashboards & data storytelling, cloud computing (AWS, Azure, DataBricks), version control, hypothesis testing, data mining, Bayesian inference, and 3D/4D visualizations & analyses. My mathematical background includes probability and statistics, multivariate calculus and linear algebra, signals processing, analytic geometry, optimization techniques, topology, and complex algebra.In machine learning and AI, I have experience with deep learning (CNN, GAN; StarDist, Cellpose, FLI-Net, Noise2Void), Graph Neural Networks (GIN, GCN, GAT), traditional machine learning techniques, computer vision, clustering methods, dimensionality reduction, and interpretability tools. I'm skilled in various programming languages and frameworks, including Python, R, Matlab, Java (ImageJ/Fiji), SQL, TensorFlow, PyTorch, Scikit-learn, PyG, and NetworkX, among others.Additionally, I have extensive experience in microscopy and imaging techniques, including light sheet fluorescence microscopy (LSFM), Two-photon laser scanning microscopy (TPLSM), Stimulated emission depletion (STED), Fluorescence lifetime imaging microscopy (FLIM), and many more advanced imaging methods.Throughout my career, I've held research positions at Elephas and Emory University, where I've led data science teams, developed novel analytical approaches, and contributed to cutting-edge research in biophysics and imaging. My work has involved projects in transcriptomics, secretomics, flow cytometry, histology, multi-photon imaging, and fluorescence lifetime imaging, among others. I'm passionate about pushing the boundaries of data science in life sciences and am always eager to tackle new challenges in this rapidly evolving field.
Fluidmomenta
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Personal Development ProjectsFluidmomenta Jul 2024 - PresentAtlanta, Georgia, United StatesProjects to align personal passions with new advances and technical trajectories.- Hamiltonian Neural Networks (HNN; Physics Informed Neural Networks (PINN)) | extending existing work to chaotic double pendulum- BioML Bits to Binders challenge: https://www.biomlsociety.org/challenge
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Principle Data ScientistElephas Oct 2022 - Jul 2024Developed and implemented life science data projects comprising data analytics, anomaly detection and machine/deep learning across a range of domains:Flow cytometry: Developed novel sunburst interactive visualization of highly multidimensional data; Applied dimensionality reduction and clustering techniques (SOM, and spectral graph clustering) for increased researcher insights and automation of repetitive traditionally manual analysis steps respectively.Transcriptomics (nanoString): Reverse engineered nSolver software and developed in-house quality control, anomaly detection, and normalization/standardization software for nanoString datasets; Uncovered and reported bug in nanoString’s Bioconductor library.Secretomics: Developed time series analysis (response curve modelling) on secretomics data to optimize researcher time point collection.Histology: Applied 3D data registrations and transformations for cross modality co-registration and alignment development; Assessed deep learning techniques for virtual histology.Multiphoton: Implemented random forest classification of tissue type regions for downstream analytics and feature engineering.Fluorescence lifetime: Compared and evaluated proprietary, open source, and custom fluorescence lifetime curve fitting software/libraries, and developed custom hybrid automated curve fit and hardware anomaly library; Developed complimentary phasor space analyses and analytics; Researched and evaluated Clifford algebra for multi-channel phasor combination analyses; Developed model-based and molecular-level two-state system photon histogram simulations for library validation and neural network training; Researched and applied deep learning techniques to determine decay parameters; Developed spatial and temporal entropy-based analyses for feature development; Developed tumor microenvironment ‘niche’ analyses via spatial statistical distribution analyses and graph neural networks. -
Director Of Artificial IntelligenceElephas Aug 2021 - Oct 2022Madison, Wisconsin, United StatesLed data science team during the initial small scale ‘startup’ phase (company size ~30 people), providing company data direction, initial data analyses and data management for researcher support, together with analytics and visualizations. -
Core DirectorEmory University School Of Medicine Jan 2019 - Aug 2021Atlanta, Georgia, United StatesOversaw and coordinated ICI staff activities and direction; Researched future technological direction to identify needed capabilities; Supported ICI team performance and training; Expanded marketing and media; Developed dashboards for internal reporting and laid groundwork to implement advanced analysis solutions for Emory imaging researchers; Authored two consecutive successful technical NIH equipment grants (total ~$1.4M) in collaboration with ~20 PI’s. -
Technical DirectorEmory University School Of Medicine Aug 2017 - Jan 2019Atlanta, Georgia, United StatesOversaw ICI’s technical direction, collaborated with research faculty, supported grants, researched and developed new data analysis avenues; Interfaced with research deans to secure cutting edge microscopy and data workflows for growing core facility; Provided consulting for technique development and performed custom data analyses and visualizations. -
Assitant ScientistEmory University School Of Medicine Nov 2016 - Aug 2017Atlanta, Georgia, United StatesContinued imaging specialist duties as below, shifting to strategic planning and core development including candidate searches, AWS data backup, event and sponsorship management, and coordinated microscope demoing and purchasing, in addition to more advanced roles in experimental design with a focus on data analysis and light sheet microscopy. -
Senior Research Imaging SpecialistEmory University School Of Medicine May 2013 - Nov 2016Emory UniversityWorked with Emory researchers using multiple fluorescence microscopes including widefield, confocal, multi-photon, live-cell, total internal reflection, and super-resolution; performed user training, microscope maintenance, and coordinated parts and repair; provided experimental design consultations, microscopy technique trainings, and imaging data analysis services; conducted marketing and education outreach via newsletters, presentations, and other media; researched and expanded core imaging capabilities, including building open-source hardware light sheet microscope.
Neil Anthony Skills
Neil Anthony Education Details
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Biophysics -
Physics
Frequently Asked Questions about Neil Anthony
What company does Neil Anthony work for?
Neil Anthony works for Fluidmomenta
What is Neil Anthony's role at the current company?
Neil Anthony's current role is Data Scientist | Life Sciences Expert | Biophysicist | Quantitative Fluorescence Microscopist | Futurist.
What is Neil Anthony's email address?
Neil Anthony's email address is ne****@****ory.edu
What is Neil Anthony's direct phone number?
Neil Anthony's direct phone number is +140472*****
What schools did Neil Anthony attend?
Neil Anthony attended Emory University Laney Graduate School, University Of Bath.
What skills is Neil Anthony known for?
Neil Anthony has skills like Fluorescence, Biophysics, Spectroscopy, Fluorescence Microscopy, Confocal Microscopy, Physics, Image Analysis, Biochemistry, Data Analysis, Characterization, Microscopy, Electron Microscopy.
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