Phan Thai Duy Tan Email and Phone Number
I have a strong passion to decipher the complexity of the human body using computer science. I have contributed to several publications in the fields of genome assembly, comparative genomics, and multi-omics single-cell sequencing, including a Genome Research paper on a novel long-read sequencing technology. I have also developed and managed products such as BioTuring DataScience Platform, BioTuring Browser, and BioTuring Enterprise Server Platform, which have been used by more than 20 pharmaceutical and biotech companies. My goal is to use my bioinformatics expertise to advance the understanding and treatment of human diseases.
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Director Of Bioinformatics Engineering And Software EngineeringDataxight Mar 2024 - PresentHo Chi Minh City, Vietnam -
Principal Bioinformatics Engineer And ManagerDnanexus Nov 2022 - PresentHo Chi Minh City, Vietnam -
Product Manager - Bioturing Datascience PlatformBioturing Jun 2021 - Jul 2022Develop the BioTuring DataScience Platform, a cloud-based platform for running and editing Jupyter notebooks to analyze single-cell datasets. -
Head Of Server PlatformBioturing Jan 2020 - Jul 2022Ho Chi Minh City, VietnamLead a team to design and implement a TCP/IP server, BioTuring Enterprise Server Platform. The software has been used by more than 20 pharmaceutical and biotech companies.Taking care of computing servers of BioTuring. Develop, deploy, maintain, and support the BioTuring Enterprise Server Platform. -
Software Engineer - Develop Bioturing Browser, A Software For Single-Cell Omics AnalysisBioturing Jun 2018 - Jun 2022Develop the analytical functions for BioTuring Browser. -
Product Manager - Develop A Genome Assembler For Tell-Seq TechnologyBioturing Jun 2018 - Jun 2020Develop a genome assembler for TELL-Seq technology. The methods and results are shown in Chen et. al. 2020 (https://pubmed.ncbi.nlm.nih.gov/32540955/). Github: https://github.com/bioturing/turingassembler.Develop a pipeline for short read alignments, variant calling, and phasing for TELL-Seq technology -
Software EngineerBioturing Jun 2016 - Jun 2018Develop BioVinci (till version 1.1.15) ), a desktop software for creating scientific graph and reports. BioVinci's citation: https://scholar.google.com/scholar?hl=vi&as_sdt=0%2C5&q=biovinci&btnG= -
Bachelor Thesis - Improve The Assembly Of The American Alligator GenomeVnuhcm - University Of Science Jun 2015 - Jun 2016Use the American alligator genome to scaffold the assemblies of two other crocodilians, the saltwater crocodile C. porosus and the gharial G. gangeticus. Used Ragout (Kolmogorov et. al. 2014) to align and find the synteny blocks shared between those crocodilians. This work helped to increase the scaffold N50 of the saltwater crocodile genome assembly from 205 kb to 84 Mb and the gharial genome assembly from 128 kb to 96 Mb. Methods and experimental results are shown in the publication Rice et. al. 2017
Phan Thai Duy Tan Skills
Phan Thai Duy Tan Education Details
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Biotechnology
Frequently Asked Questions about Phan Thai Duy Tan
What company does Phan Thai Duy Tan work for?
Phan Thai Duy Tan works for Dataxight
What is Phan Thai Duy Tan's role at the current company?
Phan Thai Duy Tan's current role is Director of Bioinformatics Engineering and Software Engineering at DataXight.
What schools did Phan Thai Duy Tan attend?
Phan Thai Duy Tan attended Vnuhcm - University Of Science.
What skills is Phan Thai Duy Tan known for?
Phan Thai Duy Tan has skills like Research, Linux, Rnaseq, R, Product Management, Single Cell, Management, Bioinformatics, Linux Tools, Compartive Genomics, Genome Assembly.
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