Stephanie Yan

Stephanie Yan Email and Phone Number

Computational Geneticist | Scientist at Genomics @ Genomics
oxford, oxfordshire, united kingdom
Stephanie Yan's Location
Baltimore, Maryland, United States, United States
About Stephanie Yan

Computational geneticist with 6+ years of experience in human genetics, genomics, and transcriptomics. In my PhD, funded by a F31 fellowship from the NIH, I used long- and short-read sequencing data to understand the role of structural variants in human evolution and gene regulation.Website: https://stephaniemyan.github.io/

Stephanie Yan's Current Company Details
Genomics

Genomics

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Computational Geneticist | Scientist at Genomics
oxford, oxfordshire, united kingdom
Website:
genomicsplc.com
Employees:
87
Stephanie Yan Work Experience Details
  • Genomics
    Scientist
    Genomics Sep 2024 - Present
  • The Johns Hopkins University
    Postdoctoral Researcher
    The Johns Hopkins University Jun 2024 - Sep 2024
    Used transcriptomics and proteomics data from geographically diverse human samples to study the regulation of gene expression. ∙ Co-led a successful $100,000 JHU Discovery Grant application for this project.∙ Research was featured by Oxford Nanopore Technologies in an interview at the ASHG 2023 conference.
  • The Johns Hopkins University
    Graduate Researcher & Nrsa (F31) Fellow
    The Johns Hopkins University Aug 2018 - May 2024
    Baltimore, Maryland, United States
    Leveraged short- and long-read sequencing data to characterize the functional impacts of genetic variants in large genomic/transcriptomic datasets.• Developed a WGS analysis pipeline, combining long-read sequencing and variant graph genotyping, to discover structural variants in a dataset of 2,504 individuals.• Extensive experience in expression/splicing QTL mapping & fine mapping.• Led functional characterization of novel genetic variants in collaboration with the Telomere-to-Telomere Consortium.• Funded by a National Institutes of Health NRSA (F31) Fellowship.• 10 publications and 6 talks at national and international conferences.
  • The Johns Hopkins University
    Course Developer & Technology Fellow
    The Johns Hopkins University Jul 2021 - May 2023
    Baltimore, Maryland, United States
    Awarded a $4,000 grant from the JHU Center for Teaching Excellence & Innovation to develop materials for a course introducing undergraduates to computational human genetics. Designed modules for genomic data analysis and visualization in R, as well as an accompanying digital textbook: https://github.com/mccoy-lab/hgv_modules
  • The Johns Hopkins University
    Quantitative Biology Teaching Assistant
    The Johns Hopkins University Jun 2020 - Aug 2022
    Baltimore, Maryland, United States
    TA for Quantitative Biology Bootcamp & Lab, a set of courses that introduce first-year biology PhD students to Python, bash, and genomic data analysis.• Worked extensively with other TAs to adapt these coding-intensive courses, normally dependent on in-person assistance, into remote/hybrid formats during the pandemic.• Consistently highlighted in anonymous student evaluations as an integral part of their success.
  • Cornell University
    Undergraduate Researcher
    Cornell University May 2016 - May 2018
    Ithaca, New York, United States
    Performed and co-designed a mutagenesis screen for identifying arrestin binding sites in transmembrane nutrient transport proteins. This method was included in a Methods in Enzymology book chapter and taught in a lab course at Hartwick College.
  • Cornell Daily Sun
    Assistant News Editor & News Writer
    Cornell Daily Sun Jan 2015 - Dec 2017
    Collaborated in a six-person news editor team to publish the paper’s daily news section, cover breaking news, assign investigative pieces, and train new writers. Helped lead The Sun's transition to web- and social media-first reporting.
  • Familius
    Editorial Intern
    Familius Jul 2015 - Dec 2015
    Worked one-on-one with authors to edit nonfiction manuscripts at the substantive editing, copy editing, and proofreading stages. Credited as the primary editor on three Familius titles.
  • Moffitt Cancer Center
    Research Trainee
    Moffitt Cancer Center Jun 2015 - Jul 2015
    Tampa, Fl
    Worked with cancer cell lines to study the impact of deoxyguanosine kinase (DGUOK), a mitochondrial protein, on the regulation of cancer metabolism and metastasis.

Stephanie Yan Education Details

Frequently Asked Questions about Stephanie Yan

What company does Stephanie Yan work for?

Stephanie Yan works for Genomics

What is Stephanie Yan's role at the current company?

Stephanie Yan's current role is Computational Geneticist | Scientist at Genomics.

What schools did Stephanie Yan attend?

Stephanie Yan attended The Johns Hopkins University, Cornell University, Stuyvesant High School.

Who are Stephanie Yan's colleagues?

Stephanie Yan's colleagues are Kate Mccall-Mccowan, Seamus Harrison Md Phd Frcs, Steven Porter, Jacob Barber, Alexandra Fish, Luke Kraven, Sneha Narasimhan, Md, Phd.

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