Wenjun He, Phd Email & Phone Number

Charleston, Sc, Us

Manager of analytics team and informatics data strategy; Work cross-functional with internal functions and external business partners.

Charleston, South Carolina, United States

1. Bridge data, present metrics and help with technical implementation for MUSC and Helix population genomics project - In Our DNA SC;2. Lead the establishment of institutional Genome Archive and Communications System (collaboration grant submitted, vendor initiative in progress);3. Participate in Clemson-MUSC Artificial Intelligence hub;4. Develop deep learning projects.

Other Projects 1. Metric reporting using research data mart and Tableau pipeline, developed 30+ graphic views for CTSA and departmental reports. 2. Project management and technical lead for MTEC project “PROWESS-ICU: Remote ICU Surge Capacity in Collaboration with Clinical Care Providers” (MTEC-20-10-COVID19-NETCCN-TATRC-059).

SPARC Project (Research Transaction Management System) 1. Design APIs between SPARCRequest and other research system; Design reports and integration with business intelligence analytics platform (Tableau) to perform real-time analytics of research studies.2. Establish Open Source (OS) governance structure for SPARC project, and research frameworks for sustainable OS development, and lead the OS technical committee. 3. Service management, including obtaining, updating, and monitoring the accuracy of over 34,000+ University, MUHA & MUSCP ancillary services; catalog management also includes the addition/deletion/updating of services.4. Research billing chargemaster and fee schedule implementation, maintenance, and updates across MUSC, as well as developing new functionality to support research-billing compliance.Research Master ID Project (Data mining and bridging) URL: https://rmid.musc.edu/ ; GitHub: https://github.com/sparc-request/research-master-id5. Data mining with clinical trial data across different electronic research platforms utilized in the institution and developed an algorithm for interfacing the systems for synchronization.6. Designed real-time and automated user interfaces and backend mechanism to avoid duplicative entry among systems to increase efficiency and credibility.7. Facilitated communication among different product owners and senior analysts to improve the data bridging algorithm and expansion of system design.InfoReady Review Implementation Project (Competitions and Reviews System) 8. Gathered and defined user needs into documentation and facilitated procurement process.9. Facilitated user training and workflow design.10. Overseeing Single-sign-on integration and API delivery.Clinical Trial Management System Implementation Project 11. Gathered user requirements and workflow for CTMS integration into RINS.12. Architectural design of system communications and API structure.13. Overseeing API development and delivery.

SPARC Project (Research Transaction Management System) MUSC instance: https://sparc.musc.edu; GitHub: https://github.com/sparc-request/sparc-requestWiki site: https://sparcrequest.atlassian.net/wiki/spaces/RD/overview1. Establish version control and supervise production releases (32 releases for SPARCRequest, 19 releases for SPARCFulfillment); Implemented Atlassian Confluence as applications documentation base.2. Form liaison among SCTR leadership, research community end-users, service providers, and development team; Meet with main user groups to gather feedbacks regularly, and translate the requirements into actionable user stories, as well as designing the data structure and user interface improvements.3. Streamline Quality Assurance (QA) process, and train personnel for QA.

Charleston, South Carolina Area

1. Developed a mobile application (SnAPPBill) prototype. SnAPP is targeted at improving the clinical billing process for Advance Practice Providers, as well as providing traceable effort record for hospital administration. The iOS version (v1.14) of the application went through beta-test with champion nurse practitioners and physician assistants, gathered user feedback and analyzed data collected. (copyright filed with Medical University of South Carolina & Clemson University)2. Investigated the impact of iodine contrast agent on radiation doses to patient undergoing radiological procedures by modeling Monte Carlo dosimetry simulations using MCNP5 platform (1 paper published).

Charleston, South Carolina

1. Estimated radiation doses to patient/staff during interventional cardiology procedures using Monte Carlo simulations, worked with medical physicists to collect clinical data from the operation rooms (with IRB exemption) to establish the baselines for modeling (3 papers published).2. Investigated the effects and efficiency of different radiation dose reduction approaches for patients undergoing CT examinations (2 papers published).3. Analyzed E/DLP and Carcinogenetic risk/DLP conversion factors for CT examinations based on ICRP 103 and BEIR VII report (2 papers published).4. Simulated and summarized the Kerma-Area Product (KAP) and total energy incident on patient in radiography, mammography and CT (1 paper published). 5. Extended training in grant writing, awarded AHA fellowship, funded within top 11 percentile.

1. Create promoter expression prediction models for 79 human tissues based on Support Vector Machine (SVM) model (LIBSVM, Python based) using GNF Atlas2 gene expression and promoter data.2. Processed and analyzed pseudogene data from Vega for building Human Genome Annotation Platform.3. Analyzed characters of UTR and CDS sequences in human genome and visualized results using Matlab.4. Developed a library management system using Visual Basic and Microsoft Access.5. Participated in designing the Survival of the Fittest educational module for Guangdong Science and Technology Exhibition Center.

Phd, Bioengineering, Medical Physics

Journal Articles: ★ W. He, W. Huda, D. Magill, E. Tavrides, H. Yao, "Patient doses and projection angle in cone beam CT," Med Phys (2010)..

Master, Bioinformatics

Bachelor, Bioinformatics, Computer Science (Double Degree)