Matthew Davis Email and Phone Number
I love data. As a kid I observed my father tracking his blood glucose blood levels to manage his diabetes. The numbers on the glucose monitor indicated the quality of his health and alerted when action was required. I learned early on that the data we collect about ourselves and the world have extraordinary value.Decades later, I pursued a Neuroscience PhD with an emphasis on computational methods and data analysis. Here I gained extensive experience building data analysis pipeline lines from scratch (Python and MATLAB), custom digital/analog experimental hardware, time series analysis, signal processing, modeling, and inferential statistics, to analyze large volumes of rodent neural activity data. In subsequent startup work I learned the tools of the trade in an applied setting, where I became proficient in SQL, git, computer vision, and writing documented and testable code in Python, producing data visualizations and distilling insights for technical/nontechnical folks.What sparks joy in me is taking complex datasets and extracting insights that have big impact.
Allen Institute
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- alleninstitute.org
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ScientistAllen Institute Mar 2022 - PresentSeattle, Washington, United States -
Graduate Research AssistantThe University Of Texas At Austin Sep 2012 - Aug 20201) Developed the lab’s first codebase for processing multi-terabyte two-photon calcium imaging data from mouse hippocampal neuronal spiking, using MATLAB and python (numpy, scipy, etc). Motion artifacts corrected using hidden markov models and image segmentation of neurons using computer vision methods in opencv. Batch processing of large datasets using cron.2) Built from scratch a real-time streaming behavioral data acquisition system based on arduino (C++) for automatic stimulus delivery and data collection of analog/digital signals from physiological sensors. 3) Developed a novel hardware/software solution using python (opencv, pillow) to capture real-time high-speed ocular data and applied markerless behavior tracking DeepLabCut (tensorflow) to extract pupil features. Used signal processing methods to detect blink artifacts and clean signals. -
Research Scientist IiiSenseye, Inc. Dec 2018 - Sep 2019Austin, Texas Metropolitan Area1) Monitored offsite data collection using PostgreSQL + custom data visualization dashboards built with python (plotly, seaborn, bokeh) that reported data quality metrics. These reports caught critical data errors, allowing early intervention, reducing costly data collection time.2) Analyzed ocular time-series data using power spectra measures/inferential statistics and wrote reports that validated the scientific merit of the product to internal/external stakeholders.3) Built a GUI tool for labeling training data in python (opencv, tkinter) which accelerated model prototyping4) Designed key experiments using pupillometry to measure cognitive load in human subjects during VR training scenarios. Conducted human studies according to approved IRB protocols. -
Co-Founder & HostBrain Matters Podcast Oct 2013 - Jun 20191) Founded and host an award- winning neuroscience podcast to promote science communication and outreach. 2) Over 1.5 million total downloads and “Top 200 Science Podcasts on iTunes”. 3) www.brainpodcast.com
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Research AssistantOregon Health & Science University 2009 - 2012Portland, Oregon Metropolitan Area
Matthew Davis Education Details
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Neuroscience -
Psychology
Frequently Asked Questions about Matthew Davis
What company does Matthew Davis work for?
Matthew Davis works for Allen Institute
What is Matthew Davis's role at the current company?
Matthew Davis's current role is Scientist at Allen Institute for Neural Dynamics.
What schools did Matthew Davis attend?
Matthew Davis attended The University Of Texas At Austin, Reed College.
Who are Matthew Davis's colleagues?
Matthew Davis's colleagues are Gabriela Martins, Amit Thakar, Ricardo Mercado, Casey Elkins, Chandan Singh, Tim Dawe, Madeline Tom.
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